Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0180 ATGGAAGAAAGTAAAAACCATCTTTCTGAACAAAGTACAAAGGGGTTTGCTAAAAACACCAAGGATAAAAAACTAAATGTGTATGTGTGGGATATGGATGAGACCATCATCCTGCTCAAGTCCTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATGTTAAAAAAGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTACTATGAACAAATAGAAAACTATAATCAGCCATTTCTTGATGTGTTGAGTGAATATGACGATGGTCGCGATCTTTCTAATTATGATTTTGATCAAGATGGTTTTGGTCCACCATGTGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGTTATAGCCAATAAGTACAGAGAGGGCCTGCAGAATATCTTTGATCAACAGAAGATGAAGCTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACTGATAGATGGTTTTCCTCAGCACGAGCTTTCTTGGAGGAGTGTTCATTTTCAGATAAACGACCACTTGCTTCTGCTGATCAGACACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATGTCTTAGTGACTTCTGGTGCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGACTTGATCATCTAATAACACCTGGAAATGTCTACAGTTCATGGGAAGTAGGCAAACTACAATGTTTCCAGTGGATCAAGGAGCGTTTTGACAAGTCAAATGTTCGTTTCTGCGCAATAGGCGATGGATGGGAAGAGTGTGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGATCTGCAACCTGGAAGTCCTCACAGGTTTCCCGGTCTGTCTTTGAAAACATTAGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAGGAATAG 957 39.29 MEESKNHLSEQSTKGFAKNTKDKKLNVYVWDMDETIILLKSLLNGTYAEAFCGSKDVKKGEELGKIWEKQILDLCDHHFYYEQIENYNQPFLDVLSEYDDGRDLSNYDFDQDGFGPPCDDGNKRKLAFRQRVIANKYREGLQNIFDQQKMKLWEELYEMTDVYTDRWFSSARAFLEECSFSDKRPLASADQTRNSTSRSSQHVNVLVTSGALIPSLVKCLLFRLDHLITPGNVYSSWEVGKLQCFQWIKERFDKSNVRFCAIGDGWEECEAAQSLKWPFVKIDLQPGSPHRFPGLSLKTLGFYFSVIYGNSDSSSDEE 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2108042 2110638 - ClG42_10g0018000.10 Clacu10g0180 258804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0180 318 NCBIfam EYA conserved domain 25 300 IPR006545 GO:0007275(InterPro)
Clacu10g0180 318 PANTHER EYES ABSENT 10 306 IPR028472 GO:0004725(PANTHER)|GO:0004725(InterPro)|GO:0005634(PANTHER)|GO:0030154(PANTHER)|GO:0045739(PANTHER)|GO:0048856(PANTHER)
Clacu10g0180 318 FunFam Eyes absent homolog 26 292 - -
Clacu10g0180 318 Gene3D - 26 288 IPR038102 -
Clacu10g0180 318 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 24 283 - -
Clacu10g0180 318 SFLD Haloacid Dehalogenase 24 283 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0180 K15616 - csv:101203755 571.622