Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0232 ATGAGTGACAACTTGCTGTGTTGGGATATCAATTTTCGACGGAACATTTGCAACAGTTCATATTTTGACGACGCGGTGTCGATCAGCTACCGGAAGAACATCAATTGTGGAGGGGAGAGCCATTCTGAATGTCGCGTTCTGATTTCATCACGACAACCAATTTCTCCTACTGTTCAACGTTTCTTCAATTCTGAAGTCCTCAGAATTTCAATTGAGTTCGCTCGCCACTTCCATGGTTTCTGTTGCCGTCTCGTTCTCTTGACTGGTGATGTTGAAGTTGGGCATAAATGTCTATGCAAAAAGAGTCTTGGAGTAAGGGAGTTGAAGAATCTGTTTTCTATCACATACTATGAGAAACGTTGTGAAAATATTCACGAAGGGTCTTTCTGTAATTTGGACCTTGGTTGGAAGGTCAGGGGGACAAAGGAAAAGAGGAATATGTTGGTGAACAAGATACGGCTCAACAAAGGTGGGTCTTGGCATCCTAACCTTGTGGAGGATGAAGGGAAGAATAAAGTGCTATTGCATCCTGGAAGTGGACAGCTTGGTTTTGGATGCCAGGGTGGTGAAGAAGGCAAGAATACTGAGGAAGGAGTTTTATCAGATGTCCCCGTGGGGACAAAGAGGAAAGACTTTTGGATATTATTTGGGATGAACTGTGTTAGTGTTTCTGAAGTTGGTGTCCCCGCTGCAATCGCATCTGGGTTATTGTTATTTTCAAGGGTTGGGCCCGCGGATGTACCCACTGAAGCTGGTGCCCCTGCTGCAATCACATCTGGGTTATTGTTATTTTCGGGGGCTGGGCCCGCCGATGTACCCACTGAAGCTAGTGCCACATTCGAGGGCCCCGCTCCCTCCACACTGGGAATCACCGAAGAGGCAACGACAGCTGAAGATAGTCTCCTAATATATTGCAAACCGGTTGAACTATACAACATTCTTCATCTTCGTTCCCTTAACAATCCTTCTTTTCTTCGACGTTGTTTGCATTACAAGTTACAAGCTAGGCGAAAAGAGAGGGTGAGCACTGGAGTTGTAATTTTCAACTATAGGGACTACAACAACATAGTTCGAAAAACTGAAGTGACTGAAGACTTCTCATGTCCATTTTGTTTGATGCTATGCGCAAGCTTTAAGGGTTTGCGCTACCACTTATGCTCTTCCCATGATATGTTCAACTTCGAATACTGGGTGACTGAAGAATATCAGGCGGTGAATGTCTCTGTGAAAATTGATGTCTTTAGATCTGAGACTGTAGCAGATGGAGTGGACCCACAACTACAAACTTTCTTCTTCTGCACAAGACCACGAAAGCGCAAGTTAAAGAACTCTATGCAGAATGGGAAGTATGTGCAGTTTTTGGAGATGGACTCACCTGGACCTGCCACAGAAGGCATGCACAAGGGATTTGTCGGGCATAACGCTGATGGTGTATCCTGTGAAAAAGAGGGGAGCCATTCATTCCCCATTGAGACTTATTTGCAGAATGCACAACAAGACGGAGAAAATATTGGCCCTGAATGTCCTTCCTCTATGGAGTGCATTGAACGTGTTGCATCCAGCTCAAATATTCCTGGTGTCTCAATGGCTATCAATCAATCTTCTACAGGTCCTGAATGTTATAAAGTACTGTCTGGAAGTGATCATTTACAACCAGCCAAAGCAAGGAAGTTAACAGTAGAACGAGACCCTAGAAACCGCATGCTCTTGCAGAAACGGCAGTTTTATCACTCTCACAGGGTTCAGCCTATGGCTCTAGATAAAGTACTATCCGACAAAGATAGTGAGGACGAAGTAGATGATGACATTGCAGATTTCGAAGACCGAAGGATGCTCGATGATTTCGTGGATGTCACCAGAGATGAAAAGCGGCTTATGCATCTATGGAACTCCTTTGTTAGAAAGCAAAGGGTGCTAGCTGATGGTCACGTGCCGTGGGCATGTGAAGCATTCTCAAAACTTCATGGGAAAGAGCTTATCTCATCTCCGCCTCTCTTTTGGTGTTGGAGACTATTCATGATCAAGCTCTGGAATCATGGTCTTCTTGATGCATCTACCATGAACAACTGTAATTTAACTCTTGAAGGATTTAAAGATGAGAGTTTGAATGCGACGAAAAACTGTAGAGGAGATGACGATTAG 2142 44.35 MSDNLLCWDINFRRNICNSSYFDDAVSISYRKNINCGGESHSECRVLISSRQPISPTVQRFFNSEVLRISIEFARHFHGFCCRLVLLTGDVEVGHKCLCKKSLGVRELKNLFSITYYEKRCENIHEGSFCNLDLGWKVRGTKEKRNMLVNKIRLNKGGSWHPNLVEDEGKNKVLLHPGSGQLGFGCQGGEEGKNTEEGVLSDVPVGTKRKDFWILFGMNCVSVSEVGVPAAIASGLLLFSRVGPADVPTEAGAPAAITSGLLLFSGAGPADVPTEASATFEGPAPSTLGITEEATTAEDSLLIYCKPVELYNILHLRSLNNPSFLRRCLHYKLQARRKERVSTGVVIFNYRDYNNIVRKTEVTEDFSCPFCLMLCASFKGLRYHLCSSHDMFNFEYWVTEEYQAVNVSVKIDVFRSETVADGVDPQLQTFFFCTRPRKRKLKNSMQNGKYVQFLEMDSPGPATEGMHKGFVGHNADGVSCEKEGSHSFPIETYLQNAQQDGENIGPECPSSMECIERVASSSNIPGVSMAINQSSTGPECYKVLSGSDHLQPAKARKLTVERDPRNRMLLQKRQFYHSHRVQPMALDKVLSDKDSEDEVDDDIADFEDRRMLDDFVDVTRDEKRLMHLWNSFVRKQRVLADGHVPWACEAFSKLHGKELISSPPLFWCWRLFMIKLWNHGLLDASTMNNCNLTLEGFKDESLNATKNCRGDDD 713
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 2805092 2827257 + ClG42_10g0023200.10 Clacu10g0232 258856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0232 713 CDD ZnB-Zn_EMF2-like 292 414 - -
Clacu10g0232 713 Pfam VEFS-Box of polycomb protein 562 691 IPR019135 -
Clacu10g0232 713 CDD VEFS-box_EMF2-like 570 696 - -
Clacu10g0232 713 PANTHER POLYCOMB GROUP PROTEIN 292 340 - GO:0005634(PANTHER)|GO:0031490(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1702 Clacu-Chr7:31793679 Clacu10g0232 Clacu-Chr10:2805092 5.80E-10 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0232 - - - 0.0