Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0351 ATGTCTGGAAGAAGGTATGGACCTATATTCAGAACAAGTTTGGTGGGAAGACCGCTGATTGTCTCAACAGACCCCGACTTGAATTACTTTATCTTTCAACAAGAGGGACAATTGTTCCAGAGCTGGTATCCTGATACCTTCACAGAGATATTTGGAAGACAAAATGTTGGTTCATTGCACGGCTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGCCCTGAAAGTCTGAGAAAGATGATACCTGAAGTTGAGGCTGTAGCAACCAGAAGATTGAGACAATGGTCATCTCATGACTCAGTTGAATTGAAGGATAAGACTGCAAGTATGATTTTTGATCTGACTGCAAAGAAGCTGATTAGTTATGATTCAGAAAATTCTTCAGAGAATTTGAGAGAGAACTTTGTTGCATTCATACAAGGCTTGATCTCCTTCCCTCTAAATGTTCCCGGAACTGCTTATAACAAATGCTTACAGGGTAGGAAAAGAGCAATGAGGATGCTGAAGAACATGTTACAAGAAAGGCGGACAAATCCAAGGAAACAACAAATTGATTTTTTCGATTTTGTTCTTGAAGAACTGGAGAAAGATGGAACTCTTCTCACTGAGGAAATTGCTTTGGACCTTATGTTTGTACTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTATTACAGCAGCCATCAAATTTCTCCTCAACAATCCTCATGTGCTGGAGGAGCTGACGGCTGAACATGAGGGAATATTGAAGAGAAGGGAAAATCCAGATTCTGGGCTTACATGGGGGGAATACAAATCCATGACGTTCACATTTCAGTTTATCAATGAAACTGTTAGACTGGCAAATATAGTTCCAGGCATCTTTCGAAAAGCACTAAAAGACATCCAGTTTAAGGGATATACTATCCCATCTGGTTGGGCTGTTATGGTCTGCCCTCCAGCTGTGCACTTAAATCCAGAAAAATACATCGACCCCCTTGCTTTTAACCCATGGCGATGGGAGAAATCTGAACTGAATGGAGCCTCTAAACATTTCATGGCTTTTGGTGGTGGCATGAGGTTCTGTGTTGGTACAGATTTTACCAAAGTGCAAATGGCTGTTTTTCTCCATTGCCTGGTTACAAAGTACAGGTTCAAAGCAATCAAAGGGGGCAACATCGTTCGAACTCCCGGTTTACAGTTTCCCAATGGCTTTCACGTTCAGATAATGGAGAAATAG 1230 40.73 MSGRRYGPIFRTSLVGRPLIVSTDPDLNYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLRKMIPEVEAVATRRLRQWSSHDSVELKDKTASMIFDLTAKKLISYDSENSSENLRENFVAFIQGLISFPLNVPGTAYNKCLQGRKRAMRMLKNMLQERRTNPRKQQIDFFDFVLEELEKDGTLLTEEIALDLMFVLLFASFETTSLAITAAIKFLLNNPHVLEELTAEHEGILKRRENPDSGLTWGEYKSMTFTFQFINETVRLANIVPGIFRKALKDIQFKGYTIPSGWAVMVCPPAVHLNPEKYIDPLAFNPWRWEKSELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPNGFHVQIMEK 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4410471 4414533 - ClG42_10g0035100.10 Clacu10g0351 258975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0351 409 Gene3D Cytochrome P450 1 408 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 352 361 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu10g0351 409 PANTHER CYTOCHROME P450 26 4 380 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Clacu10g0351 409 PRINTS E-class P450 group I signature 208 225 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 359 382 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 228 254 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 315 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 3 22 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 349 359 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS E-class P450 group I signature 275 293 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 SUPERFAMILY Cytochrome P450 4 405 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 Pfam Cytochrome P450 4 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS P450 superfamily signature 219 236 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS P450 superfamily signature 350 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS P450 superfamily signature 276 287 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g0351 409 CDD CYP90-like 4 406 - -
Clacu10g0351 409 FunFam Cytochrome P450 family protein 2 408 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0159 Clacu-Chr6:1805901 Clacu10g0351 Clacu-Chr10:4410471 2.00E-97 dispersed
Clacu10g0351 Clacu-Chr10:4410471 Clacu11g0638 Clacu-Chr11:6110154 3.20E-70 dispersed
Clacu10g0351 Clacu-Chr10:4410471 Clacu09g0062 Clacu-Chr9:628159 1.60E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0351 - - - 0.0