Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0354 ATGGGTTCTTGTCATTCGTCTCCTAAAGGGCGGCAGAACAGAGGCGGCGTTTATTCTGCCGCCGCAGCGCCAGCTGAGGCTCCGACGGCTTCTACAACAGAGTCATTTTCTTCTTCTTCTTCATTTTTGTACTCGACGACCAGTAAGCGGCGTTGGTGGAATAAGAATTCGACTAAAACTTTCGGGGTTGGGGTTTGTTCAGAGAAGGTTCATGAATTTGAGGTTCCGGGGAGGAGTTGTTCAAATGGGTCATCGAGAATTGCTTGTTTGTATACGCAGCAGGGGAAGAAAGGGGTTAATCAAGACGCCATGATTGTGCAGGAGAATTTCAGTTCAAGAAGAGATACAGTATTTTGTGGGGTATTTGATGGACATGGTCCTTTTGGACATATGGTTGCAAAAAAAGTTCGTGATACTCTCCCTCTAATCCTGTGTACACAATGGACATCTAAATCAAATCAAGATCAAAGCAACCTCTTTAAGACAAGACATTCCCGAAGTTCGAATTCTGAAGCTTCTGTTGCCCTAGATGGAGATGAAGATTCTTACAAGTCATTGGAGGCCGAAGATAATGAAAAATTCCCCAAAATGTTTCTACCACTCAAAGTATCTTTACTGAAGTCCTTCAAATTAATGGATAAAGAGTTGAAACTGCATCCCAAAATTGATTGTTTTTGCAGTGGATCGACGGCCGTGACTCTAATAAAGCAGGGTCAGAACCTTGTACTTGGAAATGTTGGTGACTCAAGAGCGGTGCTGGCTACGATAGACGAAGATAACTCTTTGATTCCAGTTCAATTAACGGTGGACTTGAAACCTGACCTTCCTGGTGAAGCTGCTAGGATCCAGCAATGCAAAGGAAGGGTCTTTGCTTTGCAGGATGAGCCCGAAGTTGCACGAGTATGGTTGCCAAATAACGATTCACCTGGTTTGGCGATGGCGAGAGCTTTTGGAGACTTTTGTCTGAAGGATTTCGGTCTTATTTCTGTTCCCGATGTTTATTATCGTCGCCTTACTGCGAGAGATCAGTTTGTAATTCTTGCCACTGATGGGGTTTGGGACGTTCTTTCGAATAAAGAAGCAATCGAAATTGTAGCATCAGCCCCTTCTCAAGAAACAGCCGCCAGAGCTCTTGTCGACTGCGCTGTTCGTGCATGGAGGCTGAAATATCCTACATCCAAGAATGACGATTGTGCTGTTGTATGTCTCTTTCTTGAGTATGAGCCTGAAGTAGAAGAAAAGACGAAAACTTGTGCAAAACCAGTGGAAGAAGTTCTGGCCATGCTGAGTGAGGACGCAAAGGACATTGAAGTTGATTCTGATGATTGTAGAACGACTGTTGTCGAGCAGTCAGGCACTCTACAAAACTCTAATGAGATTGTACCTGTCTCCGACTCAACGGATGAGAAGGTGGCAGCTGGAGGCCGAAGCCCATCGAAGAGAAGCTTAGCTGAGTGCATTTCAAGTGAAGAGGAGGAATGGTCTGCATTGGAGGGTATTACCAGAGTGAATAGTTTGCTAAGCCTTCCAAGGTTCCTCTCTGGTGACAAAAGATCAGGCAGTTGGAGGAAGTGGCTATGA 1581 44.97 MGSCHSSPKGRQNRGGVYSAAAAPAEAPTASTTESFSSSSSFLYSTTSKRRWWNKNSTKTFGVGVCSEKVHEFEVPGRSCSNGSSRIACLYTQQGKKGVNQDAMIVQENFSSRRDTVFCGVFDGHGPFGHMVAKKVRDTLPLILCTQWTSKSNQDQSNLFKTRHSRSSNSEASVALDGDEDSYKSLEAEDNEKFPKMFLPLKVSLLKSFKLMDKELKLHPKIDCFCSGSTAVTLIKQGQNLVLGNVGDSRAVLATIDEDNSLIPVQLTVDLKPDLPGEAARIQQCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPDVYYRRLTARDQFVILATDGVWDVLSNKEAIEIVASAPSQETAARALVDCAVRAWRLKYPTSKNDDCAVVCLFLEYEPEVEEKTKTCAKPVEEVLAMLSEDAKDIEVDSDDCRTTVVEQSGTLQNSNEIVPVSDSTDEKVAAGGRSPSKRSLAECISSEEEEWSALEGITRVNSLLSLPRFLSGDKRSGSWRKWL 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4496676 4505543 - ClG42_10g0035400.10 Clacu10g0354 258978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0354 526 MobiDBLite consensus disorder prediction 1 21 - -
Clacu10g0354 526 Gene3D - 77 407 IPR036457 -
Clacu10g0354 526 FunFam probable protein phosphatase 2C 33 82 408 - -
Clacu10g0354 526 SUPERFAMILY PP2C-like 82 406 IPR036457 -
Clacu10g0354 526 CDD PP2Cc 86 405 IPR001932 -
Clacu10g0354 526 PANTHER PROTEIN PHOSPHATASE 79 404 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Clacu10g0354 526 Pfam Protein phosphatase 2C 199 383 IPR001932 -
Clacu10g0354 526 SMART PP2C_4 76 403 IPR001932 -
Clacu10g0354 526 ProSiteProfiles PPM-type phosphatase domain profile. 87 405 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1780 Clacu-Chr2:31315503 Clacu10g0354 Clacu-Chr10:4496676 1.40E-111 dispersed
Clacu05g1933 Clacu-Chr5:28556357 Clacu10g0354 Clacu-Chr10:4496676 3.40E-75 dispersed
Clacu10g0354 Clacu-Chr10:4496676 Clacu11g1155 Clacu-Chr11:16443496 8.50E-132 dispersed
Clacu10g0354 Clacu-Chr10:4496676 Clacu02g0125 Clacu-Chr2:1330347 1.10E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0354 - - - 0.0