Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0386 ATGGAGTTTTCTTATATTTCTCCATTGCTCTTGTTTTTCTTTTTGCTTCAAACATCTGCCATTTCTACCAAAAAGTCTTACATTGTTTATTTGGGATCGCACTCGTTCGGACCGAACCCTTCAAGATATGATGTCCAACGTGCAACCGAGTCCCAATATGATATATTAGGATCAGTCAAGGGAAGCAAATTGGCAGCCAAAGAATCAATTATGTATTCCTACAATAGATACATTAATGGTTTTGCTGCCGTACTTGATGAAAAAGAAGCCATGGCTCTTGCGAAGAATCCAAACGTGGTGTCGGTTTTTGAGAACAAGGAAAGAAAATTGCATACAACACGATCATGGAATTTTCTTGGGGTGGATAGTGACGCAGGAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGAGAAGATACAATTATAGGCAACCTTGACACGGGTGCTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGTCCTATTCCTTCAAGGTGGAAGGGAGCTTGTGAAGCTGGCGCCAACTTTCGTTGCAATAGGAAGTTGATTGGAGCAAGATATTTCTACCAAGGATTTGCAATGTCAAAAGGTCCTCTCAATGTTAGTTTCAATAGTGCAAGAGACCAAGAAGGCCATGGTTCACACACTTTGTCCACAGCCGGAGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTTCATCTAGTGGCGGCTGTTTCGATGCTGATATCCTAGCCGGTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTACCGCAGCTCAAGACTTTGCTTATGACGCCGTTTCGATAGGGGCATTCCATGCCGTTCAACAAGGAATTGTTGTGGTTTGCTCGGGTGGAAATGATGGCCCGGCTCCTGGAACTATAAGCAATGTTTCTCCTTGGATGTTCACTGTTGCAGCTAGTTCCATCGATCGAGACTTTGTCAGTTATGTCGCTCTCGGAAACAAGAAGCATATCAAGGGTTCAAGTCTTTCATCTAGTGGATTCCCGAGTGGTAAGTTCTACCCTTTGATACATGGTGCGCAAGCAAAAGCTGCCAATGCCAGTGATAATCTTGCACAACTTTGCTTGGAGGGATCACTTGATCCCAGAAAAGCAAAAGGAAAGATTATAGTTTGCCTTCGAGGAGAAAATGGAAGAGTGGAGAAAGGTTTCGTTGTTCTTAAAGCTGGTGGCGCCGGTATGATTTTGGTGAATGACAAGCAACACGGATCAGGCACTTTGGCCGATCCCCATATAGTTCCTGCTGTTCATATAAGCTACACCGATGGTCTTTCTATCGCTCAATATATTAACTCCACCAAGGCACCCATTGCTCACATAACCTATGTAAGGACTGAGGTAGGAATTAAACCATCACCTGTCATGGCTGACTTCTCATCAAGAGGCCCTAATTCCATCACAGAAGCCACGCTCAAGCCTGATATAACAGCGCCAGGAGTTAGTATAATCGCATCGGTCACGACAGATGTAACTGCAACAGAATTGCCGTTTGATAAGCGTCGGGTGCCTTTCAGCGTTGAATCCGGCACTTCGATGTCTTGCCCACACATCTCAGGTGTTGTTGGCCTTTTGAAGACCCTTTATCCCACATGGAGTCCAGCAGCTATCAAATCTGCCATCATGACTACAGCAAAAACAAGAGACAACACCCAGCAAACAATATTGAACAACAACAAAGTGAAGGCAACCCCATTTGATTATGGTGCAGGACATGTCCATCCCAACAATGCAATGGACCCTGGCCTCGTTTATGACACGACCATTGACGACTACTTGAACTTCTTATGTGCACGAGGCTACAATGCCCTAGCTCTCAAGAAGTTCTATAACAAACCATTTGTCTGCACCAAATCATTCGCAATCACAGATCTTAACTACCCATCAATCTCGGTCCCAGAGTTGCGAACTGGCGCCCCGGTAACGGTCAATAGAAGAGTTAAGAATGTGGGAACCCCAGGAACGTACGTAGCAAAGGTGAAGGTGTCCTCGAAGGTTTCAGTTTCGGTCGTGCCGAGTACGTTGCAGTTTAATAGTGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCAATACAAAGGACAAGGAAAAGGTGAAGGCCATGTGTTTGGGACATTAATATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTCTTGCGGTGAAACTGGGATGA 2298 45.56 MEFSYISPLLLFFFLLQTSAISTKKSYIVYLGSHSFGPNPSRYDVQRATESQYDILGSVKGSKLAAKESIMYSYNRYINGFAAVLDEKEAMALAKNPNVVSVFENKERKLHTTRSWNFLGVDSDAGIPPNSIWKAARFGEDTIIGNLDTGAWPESKSFNDAGYGPIPSRWKGACEAGANFRCNRKLIGARYFYQGFAMSKGPLNVSFNSARDQEGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPSSSGGCFDADILAGFEAAISDGVDVLSVSLGTAAQDFAYDAVSIGAFHAVQQGIVVVCSGGNDGPAPGTISNVSPWMFTVAASSIDRDFVSYVALGNKKHIKGSSLSSSGFPSGKFYPLIHGAQAKAANASDNLAQLCLEGSLDPRKAKGKIIVCLRGENGRVEKGFVVLKAGGAGMILVNDKQHGSGTLADPHIVPAVHISYTDGLSIAQYINSTKAPIAHITYVRTEVGIKPSPVMADFSSRGPNSITEATLKPDITAPGVSIIASVTTDVTATELPFDKRRVPFSVESGTSMSCPHISGVVGLLKTLYPTWSPAAIKSAIMTTAKTRDNTQQTILNNNKVKATPFDYGAGHVHPNNAMDPGLVYDTTIDDYLNFLCARGYNALALKKFYNKPFVCTKSFAITDLNYPSISVPELRTGAPVTVNRRVKNVGTPGTYVAKVKVSSKVSVSVVPSTLQFNSVGEEKAFKVVFQYKGQGKGEGHVFGTLIWSDGKHFVRSPLAVKLG 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4872166 4880069 + ClG42_10g0038600.10 Clacu10g0386 259010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0386 765 CDD Peptidases_S8_3 109 586 IPR034197 -
Clacu10g0386 765 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Clacu10g0386 765 PRINTS Subtilisin serine protease family (S8) signature 212 225 IPR015500 -
Clacu10g0386 765 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Clacu10g0386 765 FunFam Subtilisin-like protease SBT1.5 141 358 - -
Clacu10g0386 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Clacu10g0386 765 Gene3D - 637 764 - -
Clacu10g0386 765 FunFam Subtilisin-like protease SBT1.5 637 765 - -
Clacu10g0386 765 SUPERFAMILY PA domain 404 475 IPR046450 -
Clacu10g0386 765 Pfam PA domain 376 468 IPR003137 -
Clacu10g0386 765 Pfam Subtilase family 141 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu10g0386 765 Pfam Peptidase inhibitor I9 26 111 IPR010259 -
Clacu10g0386 765 SUPERFAMILY Subtilisin-like 110 624 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0386 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 760 IPR045051 -
Clacu10g0386 765 FunFam subtilisin-like protease SBT1.5 345 489 - -
Clacu10g0386 765 CDD PA_subtilisin_like 351 482 - -
Clacu10g0386 765 FunFam Subtilisin-like protease SBT5.3 16 111 - -
Clacu10g0386 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Clacu10g0386 765 SUPERFAMILY Protease propeptides/inhibitors 25 108 - -
Clacu10g0386 765 Gene3D - 345 489 - -
Clacu10g0386 765 Gene3D Peptidase S8/S53 domain 141 633 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0386 765 ProSiteProfiles Serine proteases, subtilase domain profile. 115 620 - -
Clacu10g0386 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 111 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0813 Clacu-Chr7:20617322 Clacu10g0386 Clacu-Chr10:4872166 2.00E-135 dispersed
Clacu08g1226 Clacu-Chr8:22159748 Clacu10g0386 Clacu-Chr10:4872166 1.90E-150 dispersed
Clacu09g0137 Clacu-Chr9:1294650 Clacu10g0386 Clacu-Chr10:4872166 9.10E-154 dispersed
Clacu10g0386 Clacu-Chr10:4872166 Clacu10g0388 Clacu-Chr10:4900399 0.00E+00 dispersed
Clacu10g0386 Clacu-Chr10:4872166 Clacu10g0387 Clacu-Chr10:4884564 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0386 - - - 0.0