Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0388 ATGGGAAGCAAATTGGCAGCCAAACGATCAATTATCTACTCGTATAATAGATACATTAATGGCTTTGCTGCCGTACTCGACGAAAAGGAAGCCACAGCTCTTGCAAAGGATCCAAGTGTGGTGTCGGTTTTTGAAAACGAGGAAAGAGATTTGCATACAACAAGATCATGGAATTTTCTTGGAGTGGAGAGTGATGAAGAAATAATTCCTCCAAACTCCATTTGGAAAGCTGCAAGGTTTGGGGAAGATACAATTATAGGCAACCTTGACACAGGTGTTTGGCCAGAGTCCAAGAGCTTCAATGATGCAGGCTATGGCCCTGTTCCTTCAAGGTGGAGAGGAGCTTGTGAAGGTGGAGCCAACTTCAGTTGTAATAGGAAATTGATTGGAGCACGATATTTCTATCAAGGAGTTGTAAGTGCAAAGGGGCTTCTCAACAATACCTTCAACACTGCACGAGACCGTGGAGGCCATGGATCCCACACTCTGTCCACAGCCGGCGGCAACTTTGTCCCCGGAGCCAATATCTTTGGCTATGGCAATGGCACTGCAAAAGGAGGTTCCCCCAAAGCTCGTCTTGCTGCCTACAAGGTTTGCTGGCCTGCCCCTAATGGCGGCTGTTTCGATGCTGATATCCTAGCCGCTTTCGAAGCTGCCATTAGCGACGGTGTCGATGTTCTCTCCGTCTCTCTTGGTGGAAGAGCTCAAGAGTTTTCTCGTGACCCCATTTCGATAGGGGCCTTCCATGCTGTCCAACAAGGAATTGTTGTGGTTTGCTCGGGAGGAAATAAAGGTCCGACTCCTCAGACTGTAAGCAATATTTCCCCCTGGAAATTCACTGTCGCAGCTAGTTATTCCGACCGAAGCTTCACCAATTATGTAGTCCTCGAAAACAAGAAGCATTTTAAGGGTCCAAGTCTTTCATCTGGAGAATTGCCAGAGGGTAAGTTCTACCCATTGATGAATGCTGTTGAAGCAAAAGCTGCAAATGCCTCTGATAACCTTGCCCAAATTTGCGAGTACGGATCACTTGATCCTACAAAGGCAAAAGGGAAGATTATAGTTTGTCATCTAGGAGACAATTCAAGAATTGATAAGGGTTTCGAGGTTGTTCGTGTTGGTGGTGTTGGTATGATTATTGTAAATGACAAGAAAGATGGAAGTAACCTTAATATCGATCTCCACATACTTCCTGCTTCTCATTTAAACTATGAAGATGGACTTTCAATTGCTCAATATATGAATTCCACCAAAACACCCATGGCTTTCATAACACATGTAAAAACTGAGTTGGGAATTAAACCATCACCTGTCATGGCTGGATTCTCATCAAAAGGCCCTAATCCCATCACAGACTCCATGATCAAGCCTGATATAACAGCACCGGGAGCAAGTATAATTGCATCGTCCACAGAAGATGTAATGGCAACAAAATCTCAATTCGATACCCGTCGAGTGCCTTTTAATGTTCAATCTGGAACTTCTATGGCTTGCCCACACATCTCGGGTGTTGTTGGCCTTCTCAAGACCCTTTACCCTACATGGAGTCCTGCAGCTATCAAATCTGCTATCATGACTACAGCAAATACAAGAGACAACACCATGCATCCAATATTGGACTCTGACAACTTAGAGGGAACCCCATTTGATTATGGTGCAGGACATGTTAATCCTAACAATGCAATAGACCCCGGTCTCGTTTACGATACAACCATTGATGACTACTTGAACTTCTTATGTGCTTGGGGCTACAACTACACCCAACTCAAGAAATTCTCTAACAAGCCATTTGTTTGCGCCGAATCATTCGCAATCACAGATCTCAACTACCCATCGATCTCAGTTCCGAAGTTGACAATCGATGCCCCAGTGACGATCAATAGAAGAGTTAAAAATGTGGGAAGTCCAGGATCGTATGTGGCGCAAGTGAAGGTGCCTGAGGGAGTTGCGGCTACGGTCGAGCCGAATACGTTGCAATTTAACAATGTGGGTGAAGAGAAGGCTTTCAAGGTTGTATTTCGATACATAGGACAAGGACAACGTCAAGGCTATGTGTTTGGGACATTAGTATGGTCAGATGGGAAGCATTTTGTTAGAAGTCCTATTGCAATGAAATTGGGATGA 2124 44.63 MGSKLAAKRSIIYSYNRYINGFAAVLDEKEATALAKDPSVVSVFENEERDLHTTRSWNFLGVESDEEIIPPNSIWKAARFGEDTIIGNLDTGVWPESKSFNDAGYGPVPSRWRGACEGGANFSCNRKLIGARYFYQGVVSAKGLLNNTFNTARDRGGHGSHTLSTAGGNFVPGANIFGYGNGTAKGGSPKARLAAYKVCWPAPNGGCFDADILAAFEAAISDGVDVLSVSLGGRAQEFSRDPISIGAFHAVQQGIVVVCSGGNKGPTPQTVSNISPWKFTVAASYSDRSFTNYVVLENKKHFKGPSLSSGELPEGKFYPLMNAVEAKAANASDNLAQICEYGSLDPTKAKGKIIVCHLGDNSRIDKGFEVVRVGGVGMIIVNDKKDGSNLNIDLHILPASHLNYEDGLSIAQYMNSTKTPMAFITHVKTELGIKPSPVMAGFSSKGPNPITDSMIKPDITAPGASIIASSTEDVMATKSQFDTRRVPFNVQSGTSMACPHISGVVGLLKTLYPTWSPAAIKSAIMTTANTRDNTMHPILDSDNLEGTPFDYGAGHVNPNNAIDPGLVYDTTIDDYLNFLCAWGYNYTQLKKFSNKPFVCAESFAITDLNYPSISVPKLTIDAPVTINRRVKNVGSPGSYVAQVKVPEGVAATVEPNTLQFNNVGEEKAFKVVFRYIGQGQRQGYVFGTLVWSDGKHFVRSPIAMKLG 707
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4900399 4908752 + ClG42_10g0038800.10 Clacu10g0388 259012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0388 707 CDD PA_subtilisin_like 293 424 - -
Clacu10g0388 707 SUPERFAMILY Subtilisin-like 51 566 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0388 707 Gene3D - 579 706 - -
Clacu10g0388 707 CDD Peptidases_S8_3 51 529 IPR034197 -
Clacu10g0388 707 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 702 IPR045051 -
Clacu10g0388 707 Pfam Fibronectin type-III domain 607 703 IPR041469 -
Clacu10g0388 707 FunFam subtilisin-like protease SBT1.5 287 431 - -
Clacu10g0388 707 Pfam PA domain 331 410 IPR003137 -
Clacu10g0388 707 Pfam Peptidase inhibitor I9 7 52 IPR010259 -
Clacu10g0388 707 SUPERFAMILY PA domain 330 427 IPR046450 -
Clacu10g0388 707 FunFam Subtilisin-like protease SBT1.5 579 707 - -
Clacu10g0388 707 ProSiteProfiles Serine proteases, subtilase domain profile. 56 562 - -
Clacu10g0388 707 FunFam Subtilisin-like protease SBT1.5 83 312 - -
Clacu10g0388 707 Gene3D - 287 431 - -
Clacu10g0388 707 PRINTS Subtilisin serine protease family (S8) signature 492 508 IPR015500 -
Clacu10g0388 707 PRINTS Subtilisin serine protease family (S8) signature 81 100 IPR015500 -
Clacu10g0388 707 PRINTS Subtilisin serine protease family (S8) signature 154 167 IPR015500 -
Clacu10g0388 707 Pfam Subtilase family 81 537 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu10g0388 707 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 52 IPR037045 -
Clacu10g0388 707 Gene3D Peptidase S8/S53 domain 83 575 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0388 707 ProSitePatterns Serine proteases, subtilase family, serine active site. 493 503 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0386 Clacu-Chr10:4872166 Clacu10g0388 Clacu-Chr10:4900399 0.00E+00 dispersed
Clacu10g0388 Clacu-Chr10:4900399 Clacu10g0390 Clacu-Chr10:4921865 2.60E-277 dispersed
Clacu10g0387 Clacu-Chr10:4884564 Clacu10g0388 Clacu-Chr10:4900399 1.2e-312 tandem
Clacu10g0388 Clacu-Chr10:4900399 Clacu10g0389 Clacu-Chr10:4913663 2.50E-259 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0388 - - - 0.0