Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0390 ATGCCCTCTTACATTGTTTACTTGGGATCACATTCGCACGGGCTGAATCCTTCTGCAGTCGATCTCCAAATCGCAACGGAATCTCACTACAGTTTACTTGGGTCATTGTTAGGAAGCAATGAGGCAGCCAAGGAAGCAATTTTCTATTCCTACAATAGACATATCAATGGCTTTGCAGCCATGCTTGACCAAAAAGTTGCAGAAGATTTAGCAAGAAATCCTGCTGTGGCATCAGTCCATGAGAACAAGGGAAGAAAACTACACACAACAAGTTCATGGAAATTTCTTGGAGTAGAACATGATGATGGAATTCCTACAAACTCTATTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGCCAACCTTGACACAGGCGTTTGGCCAGAATCAAAGAGCTTCAGTGATGAAGGATATGGACCTGTTCCCACAAGGTGGAGGGGAAGTTGTGAAGGTGGCTCCAAATTTCATTGCAACAGGAAACTGATTGGAGCAAGGTATTTCAACAAAGGGTACGCAGCTTATGTGGGATCCCTCAATGCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACACACACATTATCTACTGCTGGAGGCAATTTCATTTCAGGGGCTAATGTATTTGGGAATGGTAATGGCACCGCAAAAGGAGGGTCCCCTAAAGCCCTTGTTGCTGCCTATAAAGTATGCTGGCCTCAAGTGGATTCTGGTGGTGCTTGTTTTGATGCTGACATTTTAGCAGCCATTGAAGCTGCTATTAGTGATGGAGTTGATGTTCTCTCACTTTCACTTGGTGGAGATTCCAAAGATTTTTCAGACGACGTTACGGCTATCGGGGCCTTCCATGCCGTTCAACAAGGTATCGTCATTGTTTGCTCTGCTGGAAACTCTGGACCAGCTCCAGGGACAGTAGAAAATGTGGCACCCTGGCTCTTAACTGTGGGTGCTAGCACAATCAACAGACAGTTTACTAGTTATGTGGCCCTTGGAAACAAGAAGCATATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAATTCTATCCATTGATCAGTGCTGCAGATGCAAAAGCCAACAATGTCTCGTTTGACAATGCCCAACTGTGTGAGGAAGGGTCACTTGATCCCAAAAAGGTAAAAGGGAAGATTATAATTTGCCTTAGAGGGGAAAATGCAAGAGTGGACAAAGGTTATGTGGCAGCTCAAGCAGGTGCTGTTGGAATGATTCTTGCTAACACTGAGCAAAATGGGAATGAACTTATAGCTGATGCACACCTACTTCCTGTTTCCCATGTAAGCTATACTGATGGCCAATCAATCTACCAATACATCAATTCCACCAAGATTCCAATGGCTTACATGACTCATGTAAGAACAGAGATGGGAATCAAACCAGCACCAGTTATGGCTTCATTCTCATCAAGAGGTCCCAATACAATTGAAGAGTCAATACTCAAGCCTGATATAACAGCACCTGGTGTCAATATACTAGCAGCCTACTCTGAAGATGCATCGCAGAGTGGTTCATCGTTTGATAATCGTCGAATTCCGTTTAATATAGTATCTGGAACTTCCATGTCATGCCCCCACATTTCTGGTATTGTTGGCCTTCTCAAGACCCTTTATCCCAAGTGGAGTCCAGCAGCTATCAAATCTGCAATCATGACCACAGCTGAAACCAGAGCCAATGACTTACATCCAATACTAAATACAGGAAAGCTTAAAGGCAACCCATTTGCATATGGTGCAGGACATGTCCATCCCAACAGGGCAATGAACCCTGGGCTTGTTTATGACCTTACCACCAAGGACTACTTGAATTTCTTGTGTGCTCAAGGCTACAACAAAACACAAATCAGTAAATTCTCGAATACGTCGTTTGTTTGTTCGAAGTCGTTCAAACTAACAGATTTCAACTACCCATCAATCTCCATACCCAACATGAAATCAGGCCCTGTGACAATCAAAAGAAGAGTTAAGAATGTGGGAAGGCCAAGCACTTATGTTGCTCGAGTGAAGGTACCCCCAGGAGTATCAGTTTCAGTTGAGCCAAGTACATTGAAGTTTAGTGGAATTGATGAAGAGAAGAGTTTCAAAGTTGTAGTGGGGAGTGTTGCAAACAACAAGCATAAAGGATATGTATTTGGGTCTTTAGCATGGGAAGATGGGAAGCATCATGTGAGAAGCCCAATTGTAGTGAATTTGGGATGA 2232 43.32 MPSYIVYLGSHSHGLNPSAVDLQIATESHYSLLGSLLGSNEAAKEAIFYSYNRHINGFAAMLDQKVAEDLARNPAVASVHENKGRKLHTTSSWKFLGVEHDDGIPTNSIWNLASFGESTIIANLDTGVWPESKSFSDEGYGPVPTRWRGSCEGGSKFHCNRKLIGARYFNKGYAAYVGSLNASYETARDHEGHGTHTLSTAGGNFISGANVFGNGNGTAKGGSPKALVAAYKVCWPQVDSGGACFDADILAAIEAAISDGVDVLSLSLGGDSKDFSDDVTAIGAFHAVQQGIVIVCSAGNSGPAPGTVENVAPWLLTVGASTINRQFTSYVALGNKKHIKGASLSDKILPAQKFYPLISAADAKANNVSFDNAQLCEEGSLDPKKVKGKIIICLRGENARVDKGYVAAQAGAVGMILANTEQNGNELIADAHLLPVSHVSYTDGQSIYQYINSTKIPMAYMTHVRTEMGIKPAPVMASFSSRGPNTIEESILKPDITAPGVNILAAYSEDASQSGSSFDNRRIPFNIVSGTSMSCPHISGIVGLLKTLYPKWSPAAIKSAIMTTAETRANDLHPILNTGKLKGNPFAYGAGHVHPNRAMNPGLVYDLTTKDYLNFLCAQGYNKTQISKFSNTSFVCSKSFKLTDFNYPSISIPNMKSGPVTIKRRVKNVGRPSTYVARVKVPPGVSVSVEPSTLKFSGIDEEKSFKVVVGSVANNKHKGYVFGSLAWEDGKHHVRSPIVVNLG 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4921865 4927875 + ClG42_10g0039000.10 Clacu10g0390 259014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0390 743 CDD PA_subtilisin_like 330 459 - -
Clacu10g0390 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 739 IPR045051 -
Clacu10g0390 743 Pfam Subtilase family 116 591 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu10g0390 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 88 IPR037045 -
Clacu10g0390 743 PRINTS Subtilisin serine protease family (S8) signature 189 202 IPR015500 -
Clacu10g0390 743 PRINTS Subtilisin serine protease family (S8) signature 116 135 IPR015500 -
Clacu10g0390 743 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Clacu10g0390 743 FunFam Subtilisin-like protease SBT1.5 616 743 - -
Clacu10g0390 743 FunFam subtilisin-like protease SBT1.5 324 468 - -
Clacu10g0390 743 FunFam Subtilisin-like protease SBT5.3 1 88 - -
Clacu10g0390 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Clacu10g0390 743 Gene3D Peptidase S8/S53 domain 119 612 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0390 743 Pfam Fibronectin type-III domain 644 740 IPR041469 -
Clacu10g0390 743 Gene3D - 324 468 - -
Clacu10g0390 743 Gene3D - 616 742 - -
Clacu10g0390 743 SUPERFAMILY PA domain 383 462 IPR046450 -
Clacu10g0390 743 CDD Peptidases_S8_3 86 565 IPR034197 -
Clacu10g0390 743 Pfam Peptidase inhibitor I9 3 88 IPR010259 -
Clacu10g0390 743 ProSiteProfiles Serine proteases, subtilase domain profile. 92 599 - -
Clacu10g0390 743 Pfam PA domain 372 447 IPR003137 -
Clacu10g0390 743 SUPERFAMILY Subtilisin-like 87 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0390 743 FunFam Subtilisin-like protease SBT1.5 118 346 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1180 Clacu-Chr1:17875578 Clacu10g0390 Clacu-Chr10:4921865 4.50E-56 dispersed
Clacu01g2489 Clacu-Chr1:35283850 Clacu10g0390 Clacu-Chr10:4921865 8.70E-173 dispersed
Clacu02g0311 Clacu-Chr2:2823402 Clacu10g0390 Clacu-Chr10:4921865 3.30E-267 dispersed
Clacu07g0650 Clacu-Chr7:11589707 Clacu10g0390 Clacu-Chr10:4921865 4.10E-140 dispersed
Clacu07g0652 Clacu-Chr7:11695233 Clacu10g0390 Clacu-Chr10:4921865 1.10E-148 dispersed
Clacu09g0866 Clacu-Chr9:8055167 Clacu10g0390 Clacu-Chr10:4921865 4.90E-124 dispersed
Clacu10g0387 Clacu-Chr10:4884564 Clacu10g0390 Clacu-Chr10:4921865 1.70E-293 dispersed
Clacu10g0388 Clacu-Chr10:4900399 Clacu10g0390 Clacu-Chr10:4921865 2.60E-277 dispersed
Clacu10g0390 Clacu-Chr10:4921865 Clacu10g0395 Clacu-Chr10:4988883 2.70E-280 dispersed
Clacu10g0389 Clacu-Chr10:4913663 Clacu10g0390 Clacu-Chr10:4921865 3.00E-274 tandem
Clacu10g0390 Clacu-Chr10:4921865 Clacu10g0391 Clacu-Chr10:4934428 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0390 - - - 0.0