Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0391 ATGCCTTTTTTGTTCCTAGAACATCCTGATGTGGTATCAGTACATGAAAACAAAGGAAGAAAACTGCACACAACACATTCATGGAACTTTCTTGGAGTTGAGAATGATGGTGCAATTCCTTCAAACTCTGTTTGGAATCTTGCAAGTTTTGGTGAATCTACAATCATTGGCAACCTTGACACAGGTGTTTGGCCAGAATCAAAGAGTTTCAATGATGAAGGATATGGACCTATCCCAACAAGGTGGAAGGGAAGTTGTGAAGGTGGCTCCAAATTTCATTGCAACAGGAAGCTGATTGGAGCAAAGTATTTCAACAAAGGGTATGCAGCCATTGTGGGACCTCTAAACTCAAGCTATGAAACAGCAAGAGACCATGAAGGGCATGGAACCCACACATTATCCACAGCAGGAGGCCATTTTGTTGAAGGAGCTAATATATTTGGGTATGGTAATGGCACTGCAAAAGGAGGGTCTCCTAAAGCTCTTGTTGCTGCCTATAAAGTTTGTTGGCCTCAAGTGCTTTTGCTTGGTGAGTGTTTTGAGGCAGACATTCTAGCTGGCTTTGAAGCTGCCATTAGTGATGGAGTTGATGTTCTTTCTGTTTCACTTGGTGGAGGTCCTCAAGATTTTGCTCATGATTCAATAGCTATAGGAGCTTTTCATGCAGTTCAGAATGGTATTACTGTTGTTTGTTCTGCTGGAAACTCTGGACCAACTCCTGGCTCTGTTTCTAATGTTGCACCATGGATTATAACTGTGGGAGCTAGCACGGTTGACAGGCTTTTTACGAATTACGTCGCGCTTGGAGACAAAAGGCACATCAAGGGTGCAAGTCTTTCTGATAAAATATTGCCAGCTCAGAAATTCTATCCATTGATCAGTGCTGTAGATGCAAAAGCCAACAATGTCTCGAACGATGACGCGGTACTATGTGAAGAAGGGTCTCTTGATCCTAAAAAGGTAAAAGGGAAGATTGTGGTTTGCCTTAGAGGGGACAATGCAAGAGTGGACAAAGGTTATGTGGCTGCTGAAGCAGGTGCTGTTGGAATGATTCTTGCTAATGACAAGGAAAATGGGGATGAAATTTTAGCTGATGCCCATCTCCTTCCTGCTTCCCATATAACCTATTCTGATGGTCAATTACTCTACCAATACATCAAATCTACCAAAACTCCAATGGCTTATATGACTCACGTGAGGACAGAGTTGGGAGTCAAACCAGCACCGATTATGGCTTCATTCTCCTCGAGAGGTCCCAACACAATGGATCCCTCAATACTCAAGCCTGATATAACAGCACCAGGAGTGAATATATTAGCAGCTTATTGTGAAGATACATCACCAACAGGTTCAAGTTTTGATGAACGTCGAGTGGCATTTAATGTAGAATCTGGGACTTCTATGTCATGCCCCCATATTGCTGGGATCGTTGGCCTTCTCAAAACACTTTATCCTAAGTGGAGTCCAGCAGCTATTAGATCTGCAATCATGACCACAGCTGGAACTCAAGCCAATGACTTGAATCCAATATTGAGCACAAAGCAAGTGAAAGCAAACGCATTGGCATATGGTGCTGGCCACGTTCGTCCAAACAAAGCAGCAAATCCCGGCCTTGTTTATGACCTTTCCACCAAAGATTACTTGAACTACTTATGTGCTCGAGGCTACAACAAAACACAAATCAAGCAATTCTCCAATCACACTTCATTTGTTTGTTCAAAATCATTCAAAATCACAGATTTGAACTACCCGTCCATCTCGATACTGGAACTGAAATCGGAGGCTGTCGTGAAGATTAAAAGGCGAGTGAAGAATGTGGGAAGTCCAGGCACGTATGTTGTTCAAGTCGACGCGCCACTGGGGGTTTCGGTTTCGGTTGAGCCAACTAGTTTGAAGTTTACTGGAGTTGATGAAGAGAAAAATTTTAGAGTTGTGTTGAAGAGTAGTGTGCCTAATGATTTTCGTGGAAAGTATGTGTTTGGGAGACTTGAATGGTCTGATGGGAACCATCATGTTAGAAGTCCGATTGTAGTGAGATTAGGTGGATGA 2049 42.9 MPFLFLEHPDVVSVHENKGRKLHTTHSWNFLGVENDGAIPSNSVWNLASFGESTIIGNLDTGVWPESKSFNDEGYGPIPTRWKGSCEGGSKFHCNRKLIGAKYFNKGYAAIVGPLNSSYETARDHEGHGTHTLSTAGGHFVEGANIFGYGNGTAKGGSPKALVAAYKVCWPQVLLLGECFEADILAGFEAAISDGVDVLSVSLGGGPQDFAHDSIAIGAFHAVQNGITVVCSAGNSGPTPGSVSNVAPWIITVGASTVDRLFTNYVALGDKRHIKGASLSDKILPAQKFYPLISAVDAKANNVSNDDAVLCEEGSLDPKKVKGKIVVCLRGDNARVDKGYVAAEAGAVGMILANDKENGDEILADAHLLPASHITYSDGQLLYQYIKSTKTPMAYMTHVRTELGVKPAPIMASFSSRGPNTMDPSILKPDITAPGVNILAAYCEDTSPTGSSFDERRVAFNVESGTSMSCPHIAGIVGLLKTLYPKWSPAAIRSAIMTTAGTQANDLNPILSTKQVKANALAYGAGHVRPNKAANPGLVYDLSTKDYLNYLCARGYNKTQIKQFSNHTSFVCSKSFKITDLNYPSISILELKSEAVVKIKRRVKNVGSPGTYVVQVDAPLGVSVSVEPTSLKFTGVDEEKNFRVVLKSSVPNDFRGKYVFGRLEWSDGNHHVRSPIVVRLGG 682
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4934428 4941980 + ClG42_10g0039100.10 Clacu10g0391 259015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0391 682 CDD PA_subtilisin_like 265 394 - -
Clacu10g0391 682 Gene3D - 551 680 - -
Clacu10g0391 682 PRINTS Subtilisin serine protease family (S8) signature 51 70 IPR015500 -
Clacu10g0391 682 PRINTS Subtilisin serine protease family (S8) signature 124 137 IPR015500 -
Clacu10g0391 682 PRINTS Subtilisin serine protease family (S8) signature 464 480 IPR015500 -
Clacu10g0391 682 FunFam Subtilisin-like protease SBT1.5 53 281 - -
Clacu10g0391 682 SUPERFAMILY PA domain 307 395 IPR046450 -
Clacu10g0391 682 Gene3D Peptidase S8/S53 domain 54 547 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0391 682 CDD Peptidases_S8_3 21 500 IPR034197 -
Clacu10g0391 682 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 677 IPR045051 -
Clacu10g0391 682 ProSitePatterns Serine proteases, subtilase family, serine active site. 465 475 IPR023828 -
Clacu10g0391 682 FunFam Subtilisin-like protease SBT1.5 551 681 - -
Clacu10g0391 682 SUPERFAMILY Subtilisin-like 22 538 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0391 682 FunFam subtilisin-like protease SBT1.5 259 403 - -
Clacu10g0391 682 Pfam Subtilase family 51 512 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu10g0391 682 Pfam Fibronectin type-III domain 580 678 IPR041469 -
Clacu10g0391 682 Pfam PA domain 309 382 IPR003137 -
Clacu10g0391 682 Gene3D - 259 403 - -
Clacu10g0391 682 ProSiteProfiles Serine proteases, subtilase domain profile. 27 534 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0391 Clacu-Chr10:4934428 Clacu10g0395 Clacu-Chr10:4988883 3.40E-258 dispersed
Clacu10g0390 Clacu-Chr10:4921865 Clacu10g0391 Clacu-Chr10:4934428 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0391 - - - 0.0