Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0395 ATGAAATTGCTCAAAAAGATAGCCAAAGAAGCTATTTTGTACTCATACAACAAGAACATCAATGGCTTTGCTGCCATGCTTGATGAAAAGCAAGCAGCAGATGTTGCAAAATTTCCGAATGTTGTTTCGGTTTTCGAAAGTCAAGCAAAAAAATTACATACAACACAATCATGGCACTTCCTTGGAATAGAAAAACATGAAGAAATTCCTCTCAACTCCATTTGGAATGCTGCAAAATTTGGTGATGATATAATCATAGCTAACTTTGACACAGGTGTTTGGCCAGAATCTAAGAGCTTCAATGATGAAGGGTATGGACCTGTCCCCACAAGGTGGAAGGGAACTTGTCAAAGTGATGCAGACCCCAAGTTCCATTGTAACAGAAAATTGATTGGATCAAGATTCTTCAACATAGGCTATGGTGAACTTAGTGCTACCTTCAATTCTTCAAGAGACAATGTAGGCCATGGAACCCACACTTTATCCATAGCTGGTGGCAATTTTGTCTCTGGAGCTAATGTTTTGGGAATGGGGAACGGAACTATTAAAGGTGGCTCCCCTCGAGCCCGTGTTGCGTCCTACAAGGTTTGTTGGCCAGAAGAAAACGGCGAGTGTTTGGACCCAAATACCTTAGCTGCTTTTGAAGCTGCAATTGACGATGGCGTTGATGTTATCTCAATTTCTGTCGGTGGAGAGCCAAAGGAGTTTTTTAGTGATGCACTCTCTGTAGGAGCTTTCCATGCAGTTGAGCGAGGTATTGTTGTTGTTTGCTCGGCTGGGAACATCGGACCAACTCCTGGGACCGTATCAAATGTGTCGCCATGGATTATAACTGTTGGCGCTAGTTCCATCAATAGGGATTTCACCAATTTTGTGGTCCTGGGGAACAAGAAGAAACTCAAGGGCACAAGCTTTTCTTCTAAGGCAATGCCATTTAACAAGTTCTACCCTCTAATCAATGCTGTGGATGCAAAAGCCAACAATGTCTCCAATAGTGATGCGGAAGTTTGTGAGGAGGGCTCGCTTGATCCCATGAAGTTAACAGGGAAGATTGTGATTTGCCTTCGAGGGGGTCTTCCAAGAGTGTCTAAGGGTTATGTAGCTGCCAAGGCAGGGGCTGTTGGAATGATTTTGGTTAACGATGAGGAAAGTGGAAATGCAATTTTAACTGATATACATATCCTTCCAGCTTCCCATGTAACCTATAATGACAGCATATCCATCTTCCAGTACATCAATTCTACAAAGACACCAACGGCTTACATTAGTTCTGTGATGACAGAACTGGAAATCAAACCATCCCCACTAATGGCTGATTTCTCATCAAGAGGCCCCAATACAATAGAGGAGTCAATCCTTAAGCCTGATATAACAGCTCCAGGTGTGAATATACTGGCGGCTTACCCCGATGGAGTACCATTGACAGAACTACCATTGGACAATCGTCAAGCTCCTTTCAAGGTAGATTCTGGCACATCCATGGCCTGTCCCCATGTTGCTGGCATTGTAGGCCTTCTCAAAATCCTAAATCCCAAATGGAGTCCAGCCGCCATTAAATCTGCAATCATGACGACAGCCAAAACAACGGACAACAGTTTACATCCAATTATGGACTCCACAGGACTCAAAGCAACTCCATTGGCATACGGTGCAGGACATGTTAATCCAAACAGTGCGATGGACCCTGGCCTCGTTTACGACATTACAATCGACGATTACCTCAATTTCTTGTGTGCTCGAGGCTACAATGCAACACAAATCAAGAAAATATCCAAGAAGACCTTCGTTTGCGATGGATCGTTCAAAGTGACGGATTTGAATTACCCTTCGATCTCAGTTATAGATCTGAAAATGGGACCTGTGACGATCAATCGAAAAGTGAAGAATGTGGGAAGTCCGGGGATGTATGTCGCTCGAGTGAAGGCGCCACTGGAAGTTTCTATCATCGTTGAGCCAAGTAGATTGCATTTTACGGCCATGGATGAAGAGAAGAGCTTCAAGGTCGTGTTGAATAGCAGTGGAAAGGGCAACGAACAAGGTTATGTGTTTGGGGAATTAGTATGGTCTGATGGCAAACACTATGTTAGGAGTCCAATTGTTGTGAATTTAGGGGAATAG 2118 43.67 MKLLKKIAKEAILYSYNKNINGFAAMLDEKQAADVAKFPNVVSVFESQAKKLHTTQSWHFLGIEKHEEIPLNSIWNAAKFGDDIIIANFDTGVWPESKSFNDEGYGPVPTRWKGTCQSDADPKFHCNRKLIGSRFFNIGYGELSATFNSSRDNVGHGTHTLSIAGGNFVSGANVLGMGNGTIKGGSPRARVASYKVCWPEENGECLDPNTLAAFEAAIDDGVDVISISVGGEPKEFFSDALSVGAFHAVERGIVVVCSAGNIGPTPGTVSNVSPWIITVGASSINRDFTNFVVLGNKKKLKGTSFSSKAMPFNKFYPLINAVDAKANNVSNSDAEVCEEGSLDPMKLTGKIVICLRGGLPRVSKGYVAAKAGAVGMILVNDEESGNAILTDIHILPASHVTYNDSISIFQYINSTKTPTAYISSVMTELEIKPSPLMADFSSRGPNTIEESILKPDITAPGVNILAAYPDGVPLTELPLDNRQAPFKVDSGTSMACPHVAGIVGLLKILNPKWSPAAIKSAIMTTAKTTDNSLHPIMDSTGLKATPLAYGAGHVNPNSAMDPGLVYDITIDDYLNFLCARGYNATQIKKISKKTFVCDGSFKVTDLNYPSISVIDLKMGPVTINRKVKNVGSPGMYVARVKAPLEVSIIVEPSRLHFTAMDEEKSFKVVLNSSGKGNEQGYVFGELVWSDGKHYVRSPIVVNLGE 705
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4988883 4992348 - ClG42_10g0039500.10 Clacu10g0395 259019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0395 705 Gene3D Peptidase S8/S53 domain 83 573 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0395 705 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 700 IPR045051 -
Clacu10g0395 705 Gene3D - 285 429 - -
Clacu10g0395 705 CDD PA_subtilisin_like 292 422 - -
Clacu10g0395 705 Pfam Subtilase family 81 532 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu10g0395 705 FunFam Subtilisin-like protease SBT1.5 83 298 - -
Clacu10g0395 705 SUPERFAMILY PA domain 344 415 IPR046450 -
Clacu10g0395 705 PRINTS Subtilisin serine protease family (S8) signature 152 165 IPR015500 -
Clacu10g0395 705 PRINTS Subtilisin serine protease family (S8) signature 81 100 IPR015500 -
Clacu10g0395 705 PRINTS Subtilisin serine protease family (S8) signature 490 506 IPR015500 -
Clacu10g0395 705 Pfam Fibronectin type-III domain 605 701 IPR041469 -
Clacu10g0395 705 FunFam Subtilisin-like protease SBT1.5 577 704 - -
Clacu10g0395 705 Gene3D - 577 703 - -
Clacu10g0395 705 Pfam Peptidase inhibitor I9 8 53 IPR010259 -
Clacu10g0395 705 ProSiteProfiles Serine proteases, subtilase domain profile. 57 560 - -
Clacu10g0395 705 FunFam subtilisin-like protease SBT1.5 285 429 - -
Clacu10g0395 705 Pfam PA domain 333 404 IPR003137 -
Clacu10g0395 705 ProSitePatterns Serine proteases, subtilase family, serine active site. 491 501 IPR023828 -
Clacu10g0395 705 CDD Peptidases_S8_3 50 526 IPR034197 -
Clacu10g0395 705 SUPERFAMILY Subtilisin-like 53 564 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu10g0395 705 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 53 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0389 Clacu-Chr10:4913663 Clacu10g0395 Clacu-Chr10:4988883 2.20E-253 dispersed
Clacu10g0390 Clacu-Chr10:4921865 Clacu10g0395 Clacu-Chr10:4988883 2.70E-280 dispersed
Clacu10g0391 Clacu-Chr10:4934428 Clacu10g0395 Clacu-Chr10:4988883 3.40E-258 dispersed
Clacu10g0395 Clacu-Chr10:4988883 Clacu11g1370 Clacu-Chr11:23999067 8.30E-82 dispersed
Clacu10g0394 Clacu-Chr10:4979397 Clacu10g0395 Clacu-Chr10:4988883 1.50E-157 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0395 - - - 0.0