Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu10g0589 | ATGGCGGAGGAGTTTCAGAGCACTGGAAACTGGTGGGAGGCTTCTAGAAATCGCTACGAAGCCGGAATATCCCCTTCCTCCTCCTCCATCACCACCTTCGTCGACCACTCCGACTCCGCCGCCGCCGCCGCCGCCTCCGATCCCAATTTGCACATCATGGGCTTAGGCCTCGATTGGAATCAACCCCTCTTTAGGGGCGGCGGAGAGAAGGCGGCGGAGGGAAGTTTCCGGTCGATGCTACAGCCGGAAAATATGAATTTAAATATGCAAGAAACAGGGCAGCAGCAGCAGCAACAGATTCAATGGATGAGATCGGAGAAGCTATATTCAGGAGAGTCTCCGGCGACCGAATTTAAGGCAATAAACAGAGGATTTTCATTAGATCATCATCAAGCTCAACCCCAGTTCAGTAGCCCTTCTCACTACAGCTCCGGTGACAGTACCGTCACCAGTTTTCCGATCGACACCGCCGCCAATTTATACGGAAATTCCGCAACATTATTACAAGGCTTATTAGCCAGCGGCGGGGAGCAGCAGCAGCAACAGCAACAACAACAACAAGTCTCAGCGGCTGTAGGTATGAACTACCCTTACAATTCCCATTTCGGAATGAACTCCGGCGAGTTAATGGCGGGAGGAGCGTCGTGGTCGCCGTCTAAAGTGCCTCAGTTTTTAAGAAACTCACCGCCAAAAGGGGCGGCGGCGGCAACTCCACATAGTCAGTTACAATTTTCGAACAACACGGCGTTCTGGAACGCGTCGGATATGAAAGACGTGAGACCCAGTTATTTTCCGGCGTCGTACAACACCGCTGCAGGTTTCGCCGATAAATCAAAGAATATATCGGAGGTTGGTGATTCGGTAACAACAGTAGGAAAAAAAAGTGGAAATGATCACAATCAGCAATCCGCCGCTGCTAAAAGGCCTCGAAATGAAACTCCTTCGCCATTGCCAGCTTTTAAGGTGAGGAAAGAGAAGATGGGGGACAGAATCACTGCGCTCCAACAACTCGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTGTCTGAAGCAATTGAATACATAAAGTTCCTCCATGAACAAGTCAGTGTTTTGAGCACTCCATATTTGAAGAGTGGAGCTGCAGTACAGCAACAACATCAGCAGCAGAGATGTGAGAAATCAAAGGAAGGAGAAGGAGGAAAGCAAGATCTAAGAAGCAGAGGGCTTTGTTTAGTTCCAGTTTCAAGTACATTTCCAGTCACTCACGAAACCACAGTTGATTTTTGGACTCCAACCTTCGGAGGAACTTTCAGATAA | 1305 | 49.12 | MAEEFQSTGNWWEASRNRYEAGISPSSSSITTFVDHSDSAAAAAASDPNLHIMGLGLDWNQPLFRGGGEKAAEGSFRSMLQPENMNLNMQETGQQQQQQIQWMRSEKLYSGESPATEFKAINRGFSLDHHQAQPQFSSPSHYSSGDSTVTSFPIDTAANLYGNSATLLQGLLASGGEQQQQQQQQQQVSAAVGMNYPYNSHFGMNSGELMAGGASWSPSKVPQFLRNSPPKGAAAATPHSQLQFSNNTAFWNASDMKDVRPSYFPASYNTAAGFADKSKNISEVGDSVTTVGKKSGNDHNQQSAAAKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVSVLSTPYLKSGAAVQQQHQQQRCEKSKEGEGGKQDLRSRGLCLVPVSSTFPVTHETTVDFWTPTFGGTFR | 434 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 7486019 | 7489963 | - | ClG42_10g0058900.10 | Clacu10g0589 | 259213 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu10g0589 | 434 | FunFam | Transcription factor bHLH123 family | 321 | 385 | - | - | |
Clacu10g0589 | 434 | Gene3D | - | 321 | 391 | IPR036638 | GO:0046983(InterPro) | |
Clacu10g0589 | 434 | SMART | finulus | 322 | 366 | IPR011598 | GO:0046983(InterPro) | |
Clacu10g0589 | 434 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 311 | 360 | IPR011598 | GO:0046983(InterPro) | |
Clacu10g0589 | 434 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 321 | 375 | IPR036638 | GO:0046983(InterPro) | |
Clacu10g0589 | 434 | CDD | bHLH_AtbHLH_like | 317 | 368 | IPR045239 | - | |
Clacu10g0589 | 434 | MobiDBLite | consensus disorder prediction | 288 | 317 | - | - | |
Clacu10g0589 | 434 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 101 | 413 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Clacu10g0589 | 434 | MobiDBLite | consensus disorder prediction | 288 | 309 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g2051 | Clacu-Chr1:32302755 | Clacu10g0589 | Clacu-Chr10:7486019 | 8.00E-25 | dispersed | |
Clacu02g0694 | Clacu-Chr2:7154410 | Clacu10g0589 | Clacu-Chr10:7486019 | 2.40E-26 | dispersed | |
Clacu03g0529 | Clacu-Chr3:5496434 | Clacu10g0589 | Clacu-Chr10:7486019 | 8.30E-38 | dispersed | |
Clacu05g2046 | Clacu-Chr5:29388641 | Clacu10g0589 | Clacu-Chr10:7486019 | 3.10E-26 | dispersed | |
Clacu07g1317 | Clacu-Chr7:27958957 | Clacu10g0589 | Clacu-Chr10:7486019 | 1.50E-23 | dispersed | |
Clacu07g1533 | Clacu-Chr7:29973013 | Clacu10g0589 | Clacu-Chr10:7486019 | 3.80E-25 | dispersed | |
Clacu09g0190 | Clacu-Chr9:1802108 | Clacu10g0589 | Clacu-Chr10:7486019 | 1.00E-17 | dispersed | |
Clacu10g0589 | Clacu-Chr10:7486019 | Clacu11g0222 | Clacu-Chr11:2009827 | 8.60E-29 | dispersed | |
Clacu10g0589 | Clacu-Chr10:7486019 | Clacu01g2316 | Clacu-Chr1:34026739 | 4.40E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu10g0589 | - | - | - | 0.0 |