Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0700 ATGGCTCTGGTGCTGCATTCTTGGAAGACTAACAAAAATGCTTACAAGGCTTTCATAGCTGCAGAATACAATGGTGTCAAACTTGACCTTTCCCCAGATTTTACAATGGGTGTAACCAATAAGAGTCCTGAATATCTCAAAATGAATCCTATTGGGAAGGTTCCTGTTCTGGAAACACCCGATGGTGCTATCTTTGAGAGCAATGCGATAGCTCGCTATGTTGCTCGTTTGAAGGACAGCGGTTTATTTGGCTCTTCTTCGATCGATTATGGACATGTTGAACAATGGATTGATTTCTCCACATTGGAAATTGATGCTCATATTTCAACTATTGTGAGGCCTAGATTTGGATATGGTGTTTACCATCCTGAGGTAGAAGAAGCTGCAAATGCTGCCCTAAAACGAGCTTTGGGTGCTTTGAACTCCTACCTTGCTTCAAACACATTCCTTGTTGGACACGCTGTGACACTGGCTGATATCATTTTGACATGCAATCTCTATTTGGGATTCACTTATGTGTTGACTAAAAGCTTTACTTCCGAGTTCCCTCATGTTGAGAGGTACTTCTGGACGTTGGTCAATCAACCAAATTTCCAAAAGATAATTGGTGAGGTAAAGCAGACAGACGCCATTCCACCAGTGAAAACACCTGAAGCGGCTGCAGCAGCTGCCAAACCAAAACCTGAGCCCAAGAAACAAGAAGAGAAGCCCAAAGCAGCACCTGCTGAGGAAGCGGAGGCACCGAAGCCCAAGGCCAAAAATCCTCTTGACCTGCTTCCTCCTAGTACGATGATTTTGGATGAGTGGAAACGTCTCTACTCCAACACTAAAACGAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGACCCTGAAGGGTACTCCCTGTGGTTCTGTGATTACAAGTACAACGACGAGAATACTGTCTCATTTGTGACTTTGAACAAAGTTGGTGGATTTCTCCAGAGAATGGATCTTGCTCGCAAGTATGCCTTTGGAAAGATGCTCGTGATCGGATCGGAGGCACCATACAAGGTGAAAGGACTATGGCTTTTCCGTGGAAAAGAAATCCCACAATTTGTGCTTGACGAGTGCTATGATATGGAGCTGTACGAGTGGAAGAAGGTCGATATCTCGGATGAAGCCCAGAAGGAGAGGGTGAACCAAATGATTGAAGACCAGGAACCATTTGAGGGTGAAGCACTTTTGGATGCCAAATGCTTCAAGTGA 1239 44.63 MALVLHSWKTNKNAYKAFIAAEYNGVKLDLSPDFTMGVTNKSPEYLKMNPIGKVPVLETPDGAIFESNAIARYVARLKDSGLFGSSSIDYGHVEQWIDFSTLEIDAHISTIVRPRFGYGVYHPEVEEAANAALKRALGALNSYLASNTFLVGHAVTLADIILTCNLYLGFTYVLTKSFTSEFPHVERYFWTLVNQPNFQKIIGEVKQTDAIPPVKTPEAAAAAAKPKPEPKKQEEKPKAAPAEEAEAPKPKAKNPLDLLPPSTMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEAPYKVKGLWLFRGKEIPQFVLDECYDMELYEWKKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 9867146 9869564 - ClG42_10g0070000.10 Clacu10g0700 259324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0700 412 Gene3D Glutaredoxin 1 74 - -
Clacu10g0700 412 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Clacu10g0700 412 CDD GST_N_EF1Bgamma 3 77 - -
Clacu10g0700 412 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 412 IPR044628 GO:0004364(InterPro)
Clacu10g0700 412 MobiDBLite consensus disorder prediction 225 251 - -
Clacu10g0700 412 MobiDBLite consensus disorder prediction 216 256 - -
Clacu10g0700 412 FunFam Elongation factor 1 gamma 79 215 - -
Clacu10g0700 412 SUPERFAMILY Thioredoxin-like 2 78 IPR036249 -
Clacu10g0700 412 Pfam Glutathione S-transferase, C-terminal domain 103 196 IPR004046 -
Clacu10g0700 412 FunFam Elongation factor 1B gamma 1 74 - -
Clacu10g0700 412 SMART EF1G_2 251 359 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu10g0700 412 SFLD Glutathione Transferase (cytosolic) 4 189 IPR040079 -
Clacu10g0700 412 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 252 412 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu10g0700 412 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 214 IPR010987 -
Clacu10g0700 412 Gene3D - 79 212 - -
Clacu10g0700 412 Pfam Elongation factor 1 gamma, conserved domain 251 359 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu10g0700 412 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 252 412 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu10g0700 412 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Clacu10g0700 412 SFLD Main (cytGST) 4 189 - -
Clacu10g0700 412 SUPERFAMILY GST C-terminal domain-like 73 210 IPR036282 -
Clacu10g0700 412 CDD GST_C_EF1Bgamma_like 89 209 - -
Clacu10g0700 412 FunFam Elongation factor 1-gamma 1 252 412 - -
Clacu10g0700 412 SUPERFAMILY eEF1-gamma domain 253 412 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0700 Clacu-Chr10:9867146 Clacu11g0204 Clacu-Chr11:1748695 9.20E-182 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0700 K03233 - csv:101215571 716.457