Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0753 ATGGCGACCAACAAGGAGAAAGAACCAGTTTGTGTGACCGGAGCCAATGGATTCATCGGATCCTGGGTCGTCCGTACGCTTTTGGAGTCTGGCTACACAACAATACATACCTCCATCTTCCCCGGCTCCGATTCTTCCCATTTGTTCAATCTCCAGGCCTCCACTAACCCTAATGCTAACCTTAGGGTTTTCGAAGCGAATGTGATGGACGGCGAGGCGGTGGCCAGGGCTGTCGAAGGCTGCAAGGGCGTATTCCACATTGCCTCACCCTGCACATTGGAGGATCCGATTGATCCGCAGAAAGAATTGGTGGAGCCGGCGGTGCAAGGCACTATCAATGTTCTTAATGCGGCGAAGAAGTTCGGAGTGAGGCGTGTTGTTCTTACTTCTTCTATTTCTGCTCTTGTCCCTAACCCCGGTTGGCCGTCTGGTATGCCTTTCGATGAATCCTCATGGACAGACATAGAGTACTGCAAATCGCGCAAGAAATGGTATCCAGTTTCAAAAACATTGGCAGAGAAATCAGCATGGGAGTTTGTAGAGAATCATGGACTGGATGTTGTTTCCATCCTGCCAGCCACATGTCTTGGTCCTCTTCTCCAACCTAATTTGAACGCAAGTTGTGCTGTATTGCTGCAGTTGCTCCAGGGATCCCAGGATAGTCAGGAATATCACTGGTTGGGTGCTGTGCATGTCAAAGATATTGCAAAAGCACAAATTTTATTGTTTGAGTCTCCCACTGCTTCTGGTAGATATCTTTGCACCAATGGTATCTATCAATTTTCCGATTTTGCGGACAAAGTCTCAAAAATATGCCCTCAATTTCCAGTTCACAGATTTGTGGGAGAAACACAACCCGGGTTGGTTGCCTGCAAAGATGCAGCCAAGAGGTTAATTGATCTGGGACTTGTTTTCACCCCTCTTGAAGTTGCCATTCAAGATACCCTTGAAAGTCTTAGAAGCAAAGGCTTTTTGGATCAGTGA 984 47.46 MATNKEKEPVCVTGANGFIGSWVVRTLLESGYTTIHTSIFPGSDSSHLFNLQASTNPNANLRVFEANVMDGEAVARAVEGCKGVFHIASPCTLEDPIDPQKELVEPAVQGTINVLNAAKKFGVRRVVLTSSISALVPNPGWPSGMPFDESSWTDIEYCKSRKKWYPVSKTLAEKSAWEFVENHGLDVVSILPATCLGPLLQPNLNASCAVLLQLLQGSQDSQEYHWLGAVHVKDIAKAQILLFESPTASGRYLCTNGIYQFSDFADKVSKICPQFPVHRFVGETQPGLVACKDAAKRLIDLGLVFTPLEVAIQDTLESLRSKGFLDQ 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 10960094 10962934 + ClG42_10g0075300.10 Clacu10g0753 259377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0753 327 CDD FR_SDR_e 10 303 - -
Clacu10g0753 327 Gene3D - 1 327 - -
Clacu10g0753 327 FunFam Cinnamoyl-CoA reductase 1 3 327 - -
Clacu10g0753 327 Pfam NAD dependent epimerase/dehydratase family 10 248 IPR001509 -
Clacu10g0753 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Clacu10g0753 327 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 317 IPR050425 GO:0016616(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0035 Clacu-Chr3:519738 Clacu10g0753 Clacu-Chr10:10960094 7.20E-81 dispersed
Clacu10g0753 Clacu-Chr10:10960094 Clacu10g1294 Clacu-Chr10:25869989 1.10E-63 dispersed
Clacu10g0753 Clacu-Chr10:10960094 Clacu11g2087 Clacu-Chr11:31671316 2.20E-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0753 - - - 0.0