Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0777 ATGTTATTGAAGTCTTTCAAAAGGAACCCTCAAATATCCAAAATAATCAAAATCTTACCCAAAACACCAGCCCTAGTAAAGATCAACGACATCTGTATGGATGATGATGACTTTTCTAAGGCAGGCAACAACGAATGGCATGGGAGTGGCTCTGGCGAGCGGACGTTCTTGCAGTGGCGCTTCTCTCTTCGGTCCGTTCGATTTGCATTGGAACTCGTAACTGAAATGGCTGGGGGAGGAATGATTCGGCAGTTGCTGAGGAAATTTCCATCTCAATCTTCAACCCCTCCATTGACCTCATCCCTTATTTCAAAGAATCAGGAAGCTGGCTTTGCTGGGATGAACTCCTTTAGAAGGCTGGCTCTTCTTGGAGCAGGCATTTCAGGGTTTTTCAGTTTTGCAACTTTGGCATCTGCTGATGAGGCAGAACATGGTTTGGAGTGTCCAAGCTACCCGTGGCCTCACCAGGGCATTTTGAGTTCATATGATCATGCTTCGATTCGTCGTGGTCATCAGGTTTACCAACAAGTTTGTGCATCTTGTCATTCCATGTCTTTAATATCATACCGTGATTTGGTTGGTGTTGCATATACTGAAGAGGAGACAAAAGCTATGGCTGCTGAAATTGAGGTAGTTGATGGACCCAATGATGAGGGTGAGATGTTCACTCGTCCAGGTAAACTCAGTGACCGGTTTCCTCAACCATATGCAAATGAACAAGCTGCTAGATTTGCTAATGGTGGAGCATACCCTCCAGATCTGAGCCTTATCACAAAAGCTCGTCATAATGGTCAGAATTATGTATTTGCCCTTCTTACTGGTTATCGTGATCCACCTGCTGGTGTTTCGATCCGAGAGGGTCTGCACTATAACCCTTATTTCCCTGGGGGAGCAATTGCGATGCCTAAGATGCTTAATGATGGAGCTGTTGAGTACGAAGATGGTACCCCTGCCACAGAAGCACAGATGGGGAAAGATGTTGTATCGTTCTTGTCATGGGCTGCTGAACCAGAAATGGAAGAAAGGAAACTGATGGGATTCAAATGGATCTTTGTGCTCTCTCTGGCTCTACTTCAGGCTGCATATTACCGGCGATTGAAGTGGTCGGTTTTGAAGTCCCGCAAGCTGGTTCTTGATGTTCAGCGAAAAGATGAAATAGGAAGACGTGTTTCCAAAACAAACAAGATACGGGTTGAGAAAGGGAAGTTAGCAAAGTTAGACAAGATTGGAATGGGCATAGGAACATCTTGGTGCAAAAGGCTTCTCGCGGGTCCTTTTTCAAGCCAATCTCGAATACGATACGATATGGTACTTGTGACCCTGCTGGTGGCTGCCACTGCCTCCCACTTACATGCCGCCAGCTCTCTCTTCCTACTTAAGCTTAAGGCATCCTCGACCTAG 1401 45.97 MLLKSFKRNPQISKIIKILPKTPALVKINDICMDDDDFSKAGNNEWHGSGSGERTFLQWRFSLRSVRFALELVTEMAGGGMIRQLLRKFPSQSSTPPLTSSLISKNQEAGFAGMNSFRRLALLGAGISGFFSFATLASADEAEHGLECPSYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPNDEGEMFTRPGKLSDRFPQPYANEQAARFANGGAYPPDLSLITKARHNGQNYVFALLTGYRDPPAGVSIREGLHYNPYFPGGAIAMPKMLNDGAVEYEDGTPATEAQMGKDVVSFLSWAAEPEMEERKLMGFKWIFVLSLALLQAAYYRRLKWSVLKSRKLVLDVQRKDEIGRRVSKTNKIRVEKGKLAKLDKIGMGIGTSWCKRLLAGPFSSQSRIRYDMVLVTLLVAATASHLHAASSLFLLKLKASST 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 12025607 12038161 + ClG42_10g0077700.10 Clacu10g0777 259401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0777 466 FunFam Cytochrome c1, heme protein, mitochondrial 338 382 - -
Clacu10g0777 466 SUPERFAMILY Cytochrome c 146 336 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 298 317 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 287 298 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 249 273 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 151 170 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 171 190 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 318 337 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 216 236 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 PRINTS Cytochrome C1 signature 337 352 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 ProSiteProfiles Cytochrome c family profile. 165 272 IPR009056 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 Gene3D - 338 383 - -
Clacu10g0777 466 Pfam Cytochrome C1 family 153 369 IPR002326 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 Gene3D - 142 337 IPR036909 GO:0009055(InterPro)|GO:0020037(InterPro)
Clacu10g0777 466 SUPERFAMILY Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor 337 380 IPR021157 -
Clacu10g0777 466 FunFam Cytochrome c1, heme protein 142 337 - -
Clacu10g0777 466 PANTHER CYTOCHROME C1 101 380 IPR002326 GO:0005750(PANTHER)|GO:0006122(PANTHER)|GO:0009055(InterPro)|GO:0020037(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0777 K00413 - csv:101215010 602.053