Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0932 ATGGCCGAGGCTGAATTGGAGAGGGGCGACGCCAATTGCGGCCTTGCTTCCATGGATTCCTCCGAGTCCCGATGGGTTTTTCAGGATGAAGATCAATCGGAGATCGACGACGACGACGACGACGAGGATAATGCAACGCGCCATCGTATGGATTTGGAATCTGAGGATGAAGATAATGTTGAGCAGAAATTGATTCGGACTGGCCCACGTATTGATTCTTTCGATGTCGAAGCCCTTGACGTCCCTGGTGCCCATAGAAATGAATACGAGGACTTCAGCGTAGGAAAGAAAATTGCTCTTGCTTTTCAGACCCTTGGAGTCGTATTTGGTGATGTTGGGACAAGCCCTCTGTATACCTTCAGTGTCATGTTCAACAAAGTTCCTATTAATGGAGACGAAGATGTGATTGGGGCATTATCGCTAGTTATCTACACCTTAATCTTGATTTCACTAGTCAAGTATGTTCTTGTTGTTCTTCTGGCAAATGATGATGGTGAAGGTGGTACTTTTGCTTTGTACTCTTTGATTTGTAGACATGCCAAGGTCAGTCTACTCCCGAATCAACTGCCTTCGGATACCCGAATATCAAGTTTTAGATTAAAGGTGCCATCAGCTGAATTGGAAAGATCACTAAAAATAAAGGAAAAACTTGAGGCTTCCCTGACCTTGAAGAAGCTTCTTTTGATGCTTGTTCTTGCTGGAACTGCTATGGTAATAGCCGATGGAGTTGTTACACCAGCAATGTCAGTAATGTCGGCTGTTGGTGGACTAAAGATTGCAGTGGATGCAATCAACCAAGATGAGGCTGTGATGATCTCAGTTGCCTGTCTTATAGTTCTGTTCAGTGTTCAGAAGTATGGCACTAGCAAAGTGGGGCTCGCTGTTGGTCCTGCATTATTTATATGGTTTTGTACACTTGCAGGCATTGGGATTTATAACCTTGTCATATATGATAGCAGTGTACTGAAGGCATTCAATCCTGTTCATATTTATTATTTCTTCAAGAGGAACTCTACCAATGCATGGTATTGCCTTGGAGGTTGTCTTTTGTGTGCTACAGGTTCCGAGGCAATGTTTGCAGATCTTTGCTATTTCTCTGTGCGGTCAATACAGCTTACATTTGTGTTTCTCGTCTTGCCTTGTCTTTTCTTGGGTTATTTGGGTCAAGCTGCCTACCTTATATCAAACCACAATGGAGCTGACCACGTATTTTTTAATTCTGTTCCCAAAAGTGCCTTTTGGCCAGTTTTTCTCATTGCCAATGTTGCTGCATTGATTGCCAGTCGGGCAATGACTACGGCTACCTTTTCATGTATAAAACAATCAACAGCACTTGGTTGTTTTCCTCGTCTTAAGATTATTCATACATCTAGGAAATTCATGGGGCAGATCTATATCCCGGTGTTGAATTGGTTTTTGTTGGCTGTTTGCCTGGTGGTCGTCTGCTCCATATCTAGCATGTATGAGATTGGAAATGCATATGGTATTGCTGAGCTGGGAGTGATGATGATGACAACTGTCTTGGTTACCATTGTTATGCTTCTTATATGGCAGATTAACATTATCATCGTTATGGTTTTTGCGATGATCTTTCTTGGGATAGAACTAATATTTTTCTCGTCTGTGTTATGGGGTGTGGGTGATGGAAGTTGGATCATATTGGTATTCGCAGTAATTATGTTTTTCATTATGTATATTTGGAACTACGGAAGCAAGCTCAAATATGAAACTGAAGTGAAGCAAAAGCTGTCAATGGATTTAATGCGAGAACTAGGGTGCAATCTCGGGACAATCAGAGCTCCTGGCATTGGTTTGCTTTATAATGAACTAGTGAAAGGAATACCTGCAATATTTGGCCATTTTCTGACTACTCTTCCTGCAGTTCATTCAATGATCATATTTGTCTGCATCAAGTACGTACCAGTTCCTGTTGTGCCTCAGAGTGAGAGATTTCTTTTCCGCCGAGTCTGCCCAAAGAGCTATCACATCTTTCGTTGCATTGCCAGGTATGGTTACAAGGATGTTCGAAAAGAAAATCATCAGACGTTTGAGCAGCTCTTAATTGAAAGCCTTGAGAAATTCATCCGTAGAGAAGCACAAGAAAGGTCATTAGAGAGCGATGGAGATGATGATACTGATTCCGACGAGACCCGCTGCTCGCGATTTCTCGTGGGTCCCAATGGAAGTGTGTATTCGCTTGGCATTCCTCTCCTTGCTGAATTCAACGAGCCTACTAGACCCATAACTGAAGTCATCAACGTACCAGAAGAGGTGCAGCCAGTGGAATCTCCAGACCCCTCGATCCCAGATGCAGAGCAATCACTTGAGAGAGAGCTTTCTTTTATACGAAAGGCTAAAGAATCAGGAGTTGTTTACCTTCTTGGTCATGGAGATATTAGAGCACGAAAGGATTCTTGGTTTATTAAGAAGCTTATGATCAATTACTTCTATGCATTTTTAAGAAAGAACAGCAGGAGGGGTATTGCCAACTTGAGTGTACCCCACACCCACCTGATGCAGTGTGCTGCAACATCCCATCTGATTTCTGTGGCGGATTGGATTCAGAGGAAGCTTTTTCACACTTTCTCCTTGGTGTCTTCCATATTGGTAGAAAAGAACATTTCCAATTTCAGTTACTCGAACACCAAAGCACAGACGGGTTCGTATGTTGTGAATAGAATGGAAGAGAACAGTCTTGACAAGGTTTGA 2709 42.64 MAEAELERGDANCGLASMDSSESRWVFQDEDQSEIDDDDDDEDNATRHRMDLESEDEDNVEQKLIRTGPRIDSFDVEALDVPGAHRNEYEDFSVGKKIALAFQTLGVVFGDVGTSPLYTFSVMFNKVPINGDEDVIGALSLVIYTLILISLVKYVLVVLLANDDGEGGTFALYSLICRHAKVSLLPNQLPSDTRISSFRLKVPSAELERSLKIKEKLEASLTLKKLLLMLVLAGTAMVIADGVVTPAMSVMSAVGGLKIAVDAINQDEAVMISVACLIVLFSVQKYGTSKVGLAVGPALFIWFCTLAGIGIYNLVIYDSSVLKAFNPVHIYYFFKRNSTNAWYCLGGCLLCATGSEAMFADLCYFSVRSIQLTFVFLVLPCLFLGYLGQAAYLISNHNGADHVFFNSVPKSAFWPVFLIANVAALIASRAMTTATFSCIKQSTALGCFPRLKIIHTSRKFMGQIYIPVLNWFLLAVCLVVVCSISSMYEIGNAYGIAELGVMMMTTVLVTIVMLLIWQINIIIVMVFAMIFLGIELIFFSSVLWGVGDGSWIILVFAVIMFFIMYIWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAVHSMIIFVCIKYVPVPVVPQSERFLFRRVCPKSYHIFRCIARYGYKDVRKENHQTFEQLLIESLEKFIRREAQERSLESDGDDDTDSDETRCSRFLVGPNGSVYSLGIPLLAEFNEPTRPITEVINVPEEVQPVESPDPSIPDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFIKKLMINYFYAFLRKNSRRGIANLSVPHTHLMQCAATSHLISVADWIQRKLFHTFSLVSSILVEKNISNFSYSNTKAQTGSYVVNRMEENSLDKV 902
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19279648 19293993 - ClG42_10g0093200.10 Clacu10g0932 259556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0932 902 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 84 844 IPR003855 GO:0000325(PANTHER)|GO:0005774(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Clacu10g0932 902 NCBIfam potassium uptake protein 100 842 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Clacu10g0932 902 Pfam K+ potassium transporter C-terminal domain 601 840 IPR053952 -
Clacu10g0932 902 MobiDBLite consensus disorder prediction 1 59 - -
Clacu10g0932 902 MobiDBLite consensus disorder prediction 42 59 - -
Clacu10g0932 902 Pfam K+ potassium transporter integral membrane domain 100 586 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0932 Clacu-Chr10:19279648 Clacu11g0182 Clacu-Chr11:1531686 1.30E-249 dispersed
Clacu10g0932 Clacu-Chr10:19279648 Clacu10g1060 Clacu-Chr10:22538122 3.00E-161 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0932 - - - 0.0