Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0944 ATGGAAAGCTTTGCTCTCCAATCTGTCTCCACTACTACTTCTTTTTCCCCCCATTCTCCCATTTCTCGAATTTCTCTCCTCCATCGCTCGAAACCCATTTCCCATTCCCTCTCGTCTCCCACTTCCCTTCATTTTTCTCGCTCGATTTCGCTATTTCAATCCACCCCACCAATCTCCCAATCCCCCCTTTTCACTTCTCGGTCTTCCCTTTTCAATCCCCTCTTCAATCCCAAATTGCGTCGAGCCTTTCCAATGCGAACCAGTGCCTCTCAATCGCCCGATAATCAGTCATTGCCACCGAACCCACCTCCCCGACAAGGTGCTAAGCCAATCCCTTTTCTGATTTCCATCGCTATTGGCCTCATTGTTCGTTTTGCCGTCCCCAAACCGGTGGAGGTTTCAGCTCAAGCCTGGCAGTTGCTCTCGATTTTCTTATCGACTATTGCTGGACTCGTTTTGAGTCCCTTGCCGGTTGGTGCTTGGGCGTTTCTTGGCTTGACTGTCGCGGTGGTTACTAAGACTTTGACGTTTGCTGCTGCTTTTAATGCTTTCACCAGTGAGGTGATTTGGTTGATTGTCATTTCCTTCTTTTTCGCTCGTGGGTTTGTGAAAACTGGGTTGGGGGACCGAATTGCGACGTATTTTGTAAAATGGATGGGGAAGAGTACAATTGGTTTGTCTTATGGTTTGACGATTAGTGAGGCTTTGATTGCCCCTGCTATGCCGAGCACTACGGCCAGGGCTGGGGGTGTGTTTTTGCCTATTATTAAGTCTTTGTCGCTTGCTGCTGATAGTAAACCGAACCACCCATCGTCTAAAAAGATCGGTGCTTACCTTATTCAATCTCAGTTTCAGTGTGCTGGTAACTCTAGTGCCCTTTTCCTAACTGGTGCTGCTCAAAACTTGTTGTGCCTTAAATTGGCTGAGGAACTTGGTGTACAAATATCTAGCCCCTGGCTTACTTGGGCCAAGTTTGCTTGTGCGCCAGCAATCATTAGTCTCTTAGTAACTCCGGCGATTTTATACAAGCTGTTTCCTCCAGAAACCAAGGACACACCTGAGGCCCCAGCCATGGCTACAAGAAAATTGGAGGCTATGGGTCCTGTCACAAAAAACGAATGGGTCATGGTCGGTACCATGCTTATTGCAGTCTCTTTATGGATTGCTGGAGAGGCCCTTAAAATTCCTAGTGTTGTAGCTGCAATGATTGGTTTATCAATACTCCTTACACTTGGAGTCCTAAACTGGGATGACTGCTTATCCGAAAAGTCAGCCTGGGATACATTAGCTTGGTTCGCTGTCCTGGTGGGCATGGCTGGCCAATTGACAAGTCTTGGTCTTGTGGGCTGGATGTCAAATTGTGTGGCTGGTTTGCTTAAGTCTCTTTCTCTCAGCTGGCCTGCAGCATTTGCTATTCTTCAGGCATCTTACTTCTTCGTTCACTACCTCTTTGCTAGCCAAACCGGTCACGTTGGCGCTTTGTACTCGGCATTCCTTGCAATGCACTTGGCTGCCAAGGTACCGGGTGTGTTGGCAGCTTTGGCCTTAGCTTACAACACAAATCTCTTTGGCGCTCTGACTCATTACAGCAGTGGCCAAGCTGCTGTATACTATGGAGCGGGTTATGTTGAGCTACCAGATGTATTCAAAATCGGTTTCGTGATGGCCCTCATAAACGGTACTATCTGGACTGTGGTTGGATGTATTTGGTGGAAGATTCTGGGTCTATATTGA 1734 47.64 MESFALQSVSTTTSFSPHSPISRISLLHRSKPISHSLSSPTSLHFSRSISLFQSTPPISQSPLFTSRSSLFNPLFNPKLRRAFPMRTSASQSPDNQSLPPNPPPRQGAKPIPFLISIAIGLIVRFAVPKPVEVSAQAWQLLSIFLSTIAGLVLSPLPVGAWAFLGLTVAVVTKTLTFAAAFNAFTSEVIWLIVISFFFARGFVKTGLGDRIATYFVKWMGKSTIGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLAADSKPNHPSSKKIGAYLIQSQFQCAGNSSALFLTGAAQNLLCLKLAEELGVQISSPWLTWAKFACAPAIISLLVTPAILYKLFPPETKDTPEAPAMATRKLEAMGPVTKNEWVMVGTMLIAVSLWIAGEALKIPSVVAAMIGLSILLTLGVLNWDDCLSEKSAWDTLAWFAVLVGMAGQLTSLGLVGWMSNCVAGLLKSLSLSWPAAFAILQASYFFVHYLFASQTGHVGALYSAFLAMHLAAKVPGVLAALALAYNTNLFGALTHYSSGQAAVYYGAGYVELPDVFKIGFVMALINGTIWTVVGCIWWKILGLY 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 19810743 19814214 - ClG42_10g0094400.10 Clacu10g0944 259568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0944 577 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 16 577 IPR030676 GO:0005215(PANTHER)
Clacu10g0944 577 Pfam Sodium:sulfate symporter transmembrane region 113 576 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu10g0944 577 NCBIfam DASS family sodium-coupled anion symporter 129 571 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu10g0944 577 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2370 Clacu-Chr2:36706741 Clacu10g0944 Clacu-Chr10:19810743 6.40E-125 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0944 - - - 0.0