Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1093 ATGGCATCATTTGCTAAAGAAAATGTAGAAAGTGGACAAGCAATTTCTAGTATTATTGGGACGGGAAAATGTGAAAGCTACGTCATTTTTAGTAATGAAACTTCCCTTGGGGATGCATTTCGGATATTCCTATACTTTATGGGCCTTGCATATTGTTTCGTTGGATTATCTGCTATTACTGCTCGATTTTTCCGGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTAGAGATAGATCCGCACACCAATACTGAAATTATTCGATATGAGAAGGTCTGGAACTTTACAATTGCAGATATCAGCTTACTGGCGTTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAACCTGTATGCTGGAGGTTTGGGACCTGGAACACTGGTTGGTTCTGCTGCTTTCGACCTTTTTCCCATTCATGCGGTTTGCGTTGTAGTGCCTAAAGCAGGGGAGTTGAAAAAAATATCTGATATAGGAGTTTGGCTAGTTGAGCTCGCTTGGTCTTTCTGGGCTTATATTTGGCTATACATTATTTTGGAGGTGTGGACACCAAATGTAATAACTCTTTGGGAAGCTTTGTTGACTGTGCTACAGTATGCATTACTGCTTACACATGCTTACGCTCAAGATAAGCAATGGCCCTACTTGTCCTTTCCTTTGGCAAGAACTGAGAGGCCAGAGGAATGGGTGCCACCTGAGATTGCTATATGCCCACAGGATAATCCCTGTAGAGACGAATTTCAAGCCCATGAGAATGAGCAGAGAACCATTGTTGACATTTTCTCTATCCATGATAAAGATGAGAAAGTGTATCATGAAGTTCCTGGACATGATGTTGCTGAATCCTCCTGTAGTAATTTTCCAGAGGAGATGGATGGAAAGGCAGACCACCCTCATGTGCTTAAAATTTGGAAACAACAGTTTGTGGATGCACTTTCGTTGGGAACTTCGGAATCAAAGAAGCTGAAAAACATTTATTTACGACTCGCAAGATTATGCTTTCAGTTGCTTCTTTTTCCATGGAGACTTTTGTTTGCTTTTGTACCTCCTTATCACATTGCTCATGGATGGCTTGCCTTTATTTGCTCCCTTATTTTCATCAGTGCGATAGCTTATGTCGTCACTAAGCTCACAGATTTAATAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACTTCTTGGCCAGATTTAGTGGCTAGTAAGATTGCTGCCGAGCGCCAGACAACGGCAGACTCTGCCATTGCAAACATTACTTGCAGCAATTCAGTGAACATATACGTGGGAATTGGAGTTCCATGGCTGATAAGCACAACATACAATTTCATAGCGTATAGAGAACCACTAAAGATAAAGGATGCAGCAGGTCTGAGCTTCAGTTTGCTGGTGTTTTTTTCAACTTCAGTGGCTTGCATTGCTGTGCTTGTGTTTAGGCGTCTAACATTAGGTGCAGAACTTGGAGGGCCAAGGCTTTGGGCTTGGGTTACATGTTTCTTTTTCATGTTGCTTTGGCTCATCTTTGTGGTGCTCTCTTCTCTCAAGGTTTATATTCCATTAGGTTCATCCTTTCAACCGTTTGTTGAATATATTCAAGATAAACTTTTTCCTTCAGGCGATCTTTCTATATCTCGTTTGACAATGTACCGGGATAATTCCAACAATTCGAGTCTTATTCGAATTATTGAAGATAAAGATATTTTGTGGTTGATATCAGTTTTATCAGATCTCCCCGAGAATGATTTATGTGTGGTAGTTGACCACGTATCTTCTGGTTCTTCTGGAAATACAATGTGTTTTAATAATGAGTTAGGAGCATATACATCTGTGGAGTTTGAGTATTACATGAGACAGTTGGGTGACCTTGCTTTGTCTATTAGACATGAGTTAGAAGATGTTGGCAAATCTAAATGGGTAGGACATTTTGTGGAAGGAGAAGATATTCATTGA 2001 40.43 MASFAKENVESGQAISSIIGTGKCESYVIFSNETSLGDAFRIFLYFMGLAYCFVGLSAITARFFRSMENVVKHSRKVVEIDPHTNTEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELAWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYALLLTHAYAQDKQWPYLSFPLARTERPEEWVPPEIAICPQDNPCRDEFQAHENEQRTIVDIFSIHDKDEKVYHEVPGHDVAESSCSNFPEEMDGKADHPHVLKIWKQQFVDALSLGTSESKKLKNIYLRLARLCFQLLLFPWRLLFAFVPPYHIAHGWLAFICSLIFISAIAYVVTKLTDLISCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGVPWLISTTYNFIAYREPLKIKDAAGLSFSLLVFFSTSVACIAVLVFRRLTLGAELGGPRLWAWVTCFFFMLLWLIFVVLSSLKVYIPLGSSFQPFVEYIQDKLFPSGDLSISRLTMYRDNSNNSSLIRIIEDKDILWLISVLSDLPENDLCVVVDHVSSGSSGNTMCFNNELGAYTSVEFEYYMRQLGDLALSIRHELEDVGKSKWVGHFVEGEDIH 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 23212422 23219117 + ClG42_10g0109300.10 Clacu10g1093 259717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1093 666 Gene3D - 321 531 IPR044880 -
Clacu10g1093 666 Gene3D - 98 236 IPR044880 -
Clacu10g1093 666 Pfam Sodium/calcium exchanger protein 365 529 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu10g1093 666 Pfam Sodium/calcium exchanger protein 45 216 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu10g1093 666 PANTHER SODIUM/CALCIUM EXCHANGER 19 223 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1093 K03452 - csv:101205540 983.4