Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu10g1292 | ATGCCGATCGATACCTCTGCAGTTTCCGGCCAAATTGTTTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCATGGCTTGTAAAGCTTCTTCTTGAGAAGGGCTACACTGTCAGAGGAACCGTTAGAAACCCAGATGACCAAAAGAATGCTCATTTGAACAACTTAGAAGGAGCTAAAGAGCGGTTGTCTTTGTTTAGTGCTGATCTTCTTGATTTTGACAGTCTCAAAGCAGCTATTATGGGTTGCCATGGTGTTTTCCACACCGCGTCTCCGGTGACCGATGATCCCGAAAAGGTGGAACAGGCCATAATCGGAACAAAGAATGTCATGACCGCGGCTGCTGAAGCAAATGTTCGACGAGTGGTGTTCACGTCGTCGATCGGCTCTGTCTACATGAACCCTAACCGAAGCCCCGACGTGGTGGTGGATGAGTCTTGTTGGAGTGACCTTGAGTTTTGCAAGAACACCAAGAATTGGTATTGTTATGCAAAGACAGTGGCAGAACAAGCAGCATGGGAAGTGGCAAAAGAAAAAGGGGTGGATCTTGTGGTCGTAAATCCAATGTTGGTATTGGGGCCTTTGTTGCAAGAAAGTGTGAATGCAAGTGTGGTTCATATAATGAAATATTTAACAGGATCAGCAAAAACATATGTAAATGCAGTTCAAGGTTATGTTGATGTCAAGGATGTTGCAAAAGCCCATGTTTTGGTTTATGAAACTCCTTCCGCTTCAGGAAGATATATTTGTGTTGAGAGTATGCTTCATCGTGGAGAATTGGTTGATATTCTTGCAAGCTTGTTCCCTCAGTATCCTCTCCCTACCAAGTAA | 828 | 44.93 | MPIDTSAVSGQIVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNAHLNNLEGAKERLSLFSADLLDFDSLKAAIMGCHGVFHTASPVTDDPEKVEQAIIGTKNVMTAAAEANVRRVVFTSSIGSVYMNPNRSPDVVVDESCWSDLEFCKNTKNWYCYAKTVAEQAAWEVAKEKGVDLVVVNPMLVLGPLLQESVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVDILASLFPQYPLPTK | 275 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 25861201 | 25862396 | - | ClG42_10g0129200.10 | Clacu10g1292 | 259916 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu10g1292 | 275 | Gene3D | - | 3 | 275 | - | - | |
Clacu10g1292 | 275 | FunFam | Cinnamoyl-CoA reductase 1 | 6 | 275 | - | - | |
Clacu10g1292 | 275 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 244 | IPR001509 | - | |
Clacu10g1292 | 275 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 268 | IPR050425 | GO:0016616(PANTHER) | |
Clacu10g1292 | 275 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 6 | 273 | IPR036291 | - | |
Clacu10g1292 | 275 | CDD | FR_SDR_e | 13 | 275 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu10g1292 | Clacu-Chr10:25861201 | Clacu10g1294 | Clacu-Chr10:25869989 | 3.00E-152 | dispersed | |
Clacu10g1292 | Clacu-Chr10:25861201 | Clacu10g1293 | Clacu-Chr10:25865357 | 1.00E-152 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu10g1292 | K09753 | - | csv:116401668 | 516.538 |