Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu10g1337 | ATGGAGTTGGTAAGCGAGAAGAGGGATTTTGATTCTTCAAACGACAACAAGAAGCTCAACTCTGCTCAACCACTTCTTGATTCTTCTTATCAACCCTCAGCCGCTGATGACACAAATGCCAAAGAAGCTGAAGAGTTAAGTGAACGCGTAGCTCGAGACCTCAAAGATGGCCTTCATCCCCTAAAGCACAAGTTTGCATTTTGGTACACTCGTCGAACACCTGGAGTTCGGACTCAAACGTCATATGAGGACAACATAAAAAAGATCGTGGACTTCAGCTCGGTTGAAGGTTTTTGGGTAAGCTATTGCCATTTGGCTCGTCCTTCTTCTTTGCCAAGCCCAACAGATCTGCATCTCTTTAAGGAAGGAATCCGTCCACTCTGGGAGGATTCTGCGAACTGCAATGGTGGAAAGTGGATAATACGATTTAAGAAAGTTGTATCTGGGCGATTTTGGGAAGATTTGGTTCTTGCATTAGTGGGCGACCAACTTGATTTTGGCGATAACATATGTGGTGCCGTGCTTAGCATTCGTTTCAACGAGGATATTTTGAGCGTCTGGAACCGCAATGCATCTGATCATCAGGCGGTGATGGGTCTGCGAGATTCAATCAAAAGGCACTTAAAGCTCCCGCATGGGTATGTAATGGAATACAAACCCCACGATGCGTCTCTGCGTGATAACTCGTCATACAGAAACACATGGTTGCGAGGGACAAAACTTAGATCCATATTGCCAGCTGCTAGACCTAGGCTATTTGTTTGTTAA | 768 | 45.18 | MELVSEKRDFDSSNDNKKLNSAQPLLDSSYQPSAADDTNAKEAEELSERVARDLKDGLHPLKHKFAFWYTRRTPGVRTQTSYEDNIKKIVDFSSVEGFWVSYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDFGDNICGAVLSIRFNEDILSVWNRNASDHQAVMGLRDSIKRHLKLPHGYVMEYKPHDASLRDNSSYRNTWLRGTKLRSILPAARPRLFVC | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 26369838 | 26379962 | + | ClG42_10g0133700.10 | Clacu10g1337 | 259961 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu10g1337 | 255 | FunFam | Eukaryotic translation initiation factor NCBP | 30 | 231 | - | - | |
Clacu10g1337 | 255 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Clacu10g1337 | 255 | Pfam | Eukaryotic initiation factor 4E | 60 | 218 | IPR001040 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Clacu10g1337 | 255 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED | 35 | 231 | IPR001040 | GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER) | |
Clacu10g1337 | 255 | SUPERFAMILY | eIF4e-like | 36 | 234 | IPR023398 | - | |
Clacu10g1337 | 255 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Clacu10g1337 | 255 | Gene3D | RNA Cap, Translation Initiation Factor Eif4e | 30 | 231 | IPR023398 | - | |
Clacu10g1337 | 255 | ProSitePatterns | Eukaryotic initiation factor 4E signature. | 116 | 139 | IPR019770 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro) | |
Clacu10g1337 | 255 | MobiDBLite | consensus disorder prediction | 16 | 36 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g0734 | Clacu-Chr6:8618825 | Clacu10g1337 | Clacu-Chr10:26369838 | 4.20E-26 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu10g1337 | K03259 | - | csv:101204290 | 479.174 |