Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1536 ATGGAGATTCTGAGAAGAAGAGTCGACGGCGGTGTGCTTCTGGTGGCGGCCGCTCTGGTGGTACTGCTGGCGGCGGTACCGGAAGTATCAGCGACACGGTGGACTGTCGGTGGCAACATGGGTTGGACTACCAATGTGAACTACACTATCTGGGCTCAGGGAAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAATTGCAATTCTGATCATCCACTCCACAATTTCACCACTGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCTTATTACTTCATAAGTGGCAAGGGCTTTTGCTATGGAGGCATGAAGCTCGCTATCCATGTCGAACACCTACCTCCCCCGCCCTCGGCCTCACACTTGAACGAAAAGAGCAGTGCTCTCAGATCTACCTACATTGGCCACACCCCATTTGTTTTAACTGCTGTTTTCGCCATTGCTGCTCTGTACGAAGCTTTAGCCCAGGTCTGGTAG 537 49.91 MEILRRRVDGGVLLVAAALVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYENCNSDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSASHLNEKSSALRSTYIGHTPFVLTAVFAIAALYEALAQVW 178
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28643971 28645395 + ClG42_10g0153600.10 Clacu10g1536 260160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1536 178 Pfam Plastocyanin-like domain 42 124 IPR003245 GO:0009055(InterPro)
Clacu10g1536 178 ProSiteProfiles Phytocyanin domain profile. 32 132 IPR003245 GO:0009055(InterPro)
Clacu10g1536 178 PANTHER BLUE COPPER PROTEIN 21 135 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Clacu10g1536 178 FunFam Lamin-like protein 30 133 - -
Clacu10g1536 178 Gene3D - 30 133 IPR008972 -
Clacu10g1536 178 SUPERFAMILY Cupredoxins 31 130 IPR008972 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1536 - - - 0.0