Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1618 ATGGGAAAGAGTGAAGAAGAACAGCCGCTGCCGGTTGGAGTGAGCTCCTCTGAGCTTTCTGACCGGAATGTGGAGAGCAGATGCGGCGGCGGTGGGTGCTCTGGGATTCGTAGACTGATTGCGGTGAGATGTGTCTTCTTCCTGTTATTATCGGCGGCTGTGTTTCTTTCTGCTATTTTTTGGCTGCCACCGTTCCTTTCCGATGGAAATTGGCCGGATCGGCCTATTGATTCTGCTTATAGAGATCATGAAATAGTAGCAAGTTTTCATGCTTGGAAGCCAGTTCCTTTTATGGAAAACCATATTTTTGAGCTTGAGGATAACATTTTTGGAGAAATACCCGTACCATTTGTCAAGGTGGTTATCCTCTCACTACAATCATTAGGTGGACCAAACGTAACAAAAATTGTTTTTGCGGTAGATTCTGATGCAAAGTATTCAAAAATTCCCCCAACATCTCAAAGTTTAATCAAGGATACCTTTGAAACATTGGTTATAAATGAACCTCCTCTGAGATTGAATGCATCATTATTTGGCAATACATCCTTATTCGAGGTGTTGAAATTTCCTGGAGGAATAACTATTATTCCTCCTCAGAGTGCATTTCCTCTGCAGGCGGCACGGATCTATTTCAACTTCACATTAAATTATTCTATTTATCAAATTCAAGTGAATTTTGATGATCTTACCAGCCAGTTGAGGTCAGGATTACATCTATCTCCTTATGAGAATTTGTATGTTAGCCTATCGAACAAAAGAGGTTCAACAATACATTCCCCCACTATTGTCCAGTCATCTGTTCTGATGGCAATTGGGACTAACTCATCGAAACAAAGGCTAAAACAGTTGGCTCAAACCATCACAAATTCTCATTCAGGAAACCTTGGCCTGAACAACACTGTATTTGGTAAGGTCAAGCAGGTGCGTCTTTCATCAGTCCTAAACCACTCTCTTGGTGGTGGTGGCAGTGCTCGGTCACCTTCACCTGCGCCTCTGCCTCATTCTCACCACCATCACCACCACCATCACCACCACCATCACCACCATTACCACCATCACCACCACCACCACAATCAGGATGCTGCATACTCACCTAGTCCTGGAACAGAGGAGCACAAACATGCACTGAAGAATGGGGTCTCATCTGCTCCCGAAGCTGGTTCATCTCCAGTGGAAAGTCCAACTGCAAATAAAAGAAACTATGAAGCTACTCCGCCTGCTTTTCAATATGGATATAAGAGGTCTTCAAGAAAAGTCAGAAAACAATCTCATTTAGGCCCTATTCCTTCTCGAAGCAGTCCTCCATTGTCACCATTCTTACGAGTAGGCCTGCCAGCACCTGTTTCTGATTCTATTTCTGCTTCAAGTCCACTGTCAGGTGTAGTTCTATCTAGTGTACAGTCTCCAAATACAGGCAGTGGACATGCAGAAAATTTTGAAAGAAGTCCCCCTTCAGTCTTACCACCTCAATTTTCTTGCATGTGCGAAAATTGTGGGAGAGAGTTCTTGAAATCCAACCGATGTTTGCCTGGAACTAATTTTGCTCCAATGATTACACAGAGGCACAAGGCTGCAACTGTTACAGTTTCTGATGGAAAGTAA 1602 43.45 MGKSEEEQPLPVGVSSSELSDRNVESRCGGGGCSGIRRLIAVRCVFFLLLSAAVFLSAIFWLPPFLSDGNWPDRPIDSAYRDHEIVASFHAWKPVPFMENHIFELEDNIFGEIPVPFVKVVILSLQSLGGPNVTKIVFAVDSDAKYSKIPPTSQSLIKDTFETLVINEPPLRLNASLFGNTSLFEVLKFPGGITIIPPQSAFPLQAARIYFNFTLNYSIYQIQVNFDDLTSQLRSGLHLSPYENLYVSLSNKRGSTIHSPTIVQSSVLMAIGTNSSKQRLKQLAQTITNSHSGNLGLNNTVFGKVKQVRLSSVLNHSLGGGGSARSPSPAPLPHSHHHHHHHHHHHHHHYHHHHHHHNQDAAYSPSPGTEEHKHALKNGVSSAPEAGSSPVESPTANKRNYEATPPAFQYGYKRSSRKVRKQSHLGPIPSRSSPPLSPFLRVGLPAPVSDSISASSPLSGVVLSSVQSPNTGSGHAENFERSPPSVLPPQFSCMCENCGREFLKSNRCLPGTNFAPMITQRHKAATVTVSDGK 533
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 29550702 29555591 + ClG42_10g0161800.10 Clacu10g1618 260242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1618 533 MobiDBLite consensus disorder prediction 1 26 - -
Clacu10g1618 533 MobiDBLite consensus disorder prediction 316 436 - -
Clacu10g1618 533 PANTHER F20B24.21 1 483 - -
Clacu10g1618 533 MobiDBLite consensus disorder prediction 462 478 - -
Clacu10g1618 533 MobiDBLite consensus disorder prediction 462 483 - -
Clacu10g1618 533 MobiDBLite consensus disorder prediction 332 358 - -
Clacu10g1618 533 MobiDBLite consensus disorder prediction 382 402 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0641 Clacu-Chr4:20173657 Clacu10g1618 Clacu-Chr10:29550702 1.20E-95 dispersed
Clacu05g1131 Clacu-Chr5:10370402 Clacu10g1618 Clacu-Chr10:29550702 2.70E-46 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1618 - - - 0.0