Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1716 ATGGCTAATCCAGACTACCTTCTTCTTCTCTCTCTCTTGTTGACCTCCTTTCTCTTTGTTCAAGTCATCTTCACTCGAATTCGACCCGACAGGCTTCGTCGTCCACCAAGCCCTCCGTCGTGGCCGGTGGTCGGCCACCTCCACCTCCTTGGTAGAATCCCTCACCAAGCCTTTCACAAACTGTCATGTCAATATGGACCATTAATGCATCTCTTCTTGGGCTCTAAGCGTTGTGTTATTGTCTCCAATTCAGAAATGGCTAAACAATTCCTCAAAACTAATGAATCCTTCTTTCTTAACAGACCCATTAGACTCAACATAAACTATCTCACTTATGGCTCTGCGGACTTCACTTTTGCACCCTATGGACCCTATTGGAAGTTCTTGAAAAAGCTTTGCATGACAGAGCTCCTCGGTGGTCGGACCCTCGACCTCCACCGCCCGATAAGGGACAAGGAAATGAGGTTGTTTGTGCAAAGGATTCATGAACAGGCTATTGTAGGAAAGATGGTTGATGTTGGAGCTGAGCTTTCAAGGTTGATGAACAACATAATATCGAGGATGGCACTGAGGAGACGATGCTCGGAGAAGGAAGATGGATCAGAAGAGGTCGGGAAGCTGGTGGGGGAGATGTGCGAGCTAGCTGGAGAACTTAACATCGCCGACATGATTTGGTTCTGCAAGGGATTGGATCTACAAGGGTTTCGAAGACGAGTTAAAGATGTGAGAAACAGGTATGATATAATGATGGAGAAGATATTAAAGGAGCATGAACAACACAGGAAGAAAAAGAAAGATGATGGAGTTAAGGATTTTCTTGATGTCTTACTTCACATTTATGAAGATAAAACCTCACAAATCAAACTCACAAGAGAGAATATTAAGGCTTTTGTTATGAACATATTCGGCGCCGGAACTGAAACATCCGCCGCGGCGACAGAGTGGGCATTAGCGGAGCTAATTAACAACCCATCCGCCATGGCCAAAGCAACTCAAGAACTCGACTCCATCACCGGAAAAACCCGTCTCCTTCACGAATCCGATCTCCCCAATCTCCCCTATCTCCAAGCCGTCGTCAAAGAGACTCTCCGCCTCCACCCGACGGCGCCGCTTATCGTCCGGGAGGCCACCGAGTCCTGCACCGTCGCCGGCTACCACATTCCAGCCAAGACCCGCCTGCTCGTCAATGTCTGGTCCATAGCCCGCGACCCGACCCACTGGCCCGATCCGAGCCGGTTCGACCCGGATCGGTTCTTGAACCACCCACCCGGTTCCGACTTGCAGAGCTTTGATCTTATGCCGTTTGGAAGTGGTTGTCGGAGCTGCCCCGGCGCTGCCCTGGCGCTGGTGGCGGTGCCGGCGGTTCTCGGGAGGTTAATTCAGTGCTTTGAGTGGAGGGTTGACGGCGGCAGCGGCATTGATATGGAAGAAGGGCCGGGAATCTCTCTCCGGCGAGCTCGTCCGTTGGTTCTAATACCAGTGCCTAGGCTTCATCCTTTTCCTTCTATTTAG 1512 50.53 MANPDYLLLLSLLLTSFLFVQVIFTRIRPDRLRRPPSPPSWPVVGHLHLLGRIPHQAFHKLSCQYGPLMHLFLGSKRCVIVSNSEMAKQFLKTNESFFLNRPIRLNINYLTYGSADFTFAPYGPYWKFLKKLCMTELLGGRTLDLHRPIRDKEMRLFVQRIHEQAIVGKMVDVGAELSRLMNNIISRMALRRRCSEKEDGSEEVGKLVGEMCELAGELNIADMIWFCKGLDLQGFRRRVKDVRNRYDIMMEKILKEHEQHRKKKKDDGVKDFLDVLLHIYEDKTSQIKLTRENIKAFVMNIFGAGTETSAAATEWALAELINNPSAMAKATQELDSITGKTRLLHESDLPNLPYLQAVVKETLRLHPTAPLIVREATESCTVAGYHIPAKTRLLVNVWSIARDPTHWPDPSRFDPDRFLNHPPGSDLQSFDLMPFGSGCRSCPGAALALVAVPAVLGRLIQCFEWRVDGGSGIDMEEGPGISLRRARPLVLIPVPRLHPFPSI 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30673031 30675964 - ClG42_10g0171600.10 Clacu10g1716 260340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1716 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu10g1716 503 Gene3D Cytochrome P450 22 490 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 SUPERFAMILY Cytochrome P450 35 496 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 14 496 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Clacu10g1716 503 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1716 503 FunFam Cytochrome P450 family protein 27 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0082 Clacu-Chr4:1755147 Clacu10g1716 Clacu-Chr10:30673031 1.90E-165 dispersed
Clacu07g1463 Clacu-Chr7:29277852 Clacu10g1716 Clacu-Chr10:30673031 3.70E-108 dispersed
Clacu10g1716 Clacu-Chr10:30673031 Clacu03g0323 Clacu-Chr3:3737323 3.70E-84 dispersed
Clacu10g1716 Clacu-Chr10:30673031 Clacu10g1717 Clacu-Chr10:30680197 1.20E-103 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1716 K24188 - csv:101205411 814.683