Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1717 ATGAAGGCCATGACCTCCATCTTTGACAACACCACCTCTCCCCTTCAATTTTGGTGCTTCTGCTTCATCACTTCCATCCTCCTCTATCTCTTCCTCAAAAAACATCTCCCAAACCCTAAACCCTCACCTCCTCGCACCCCCGCGCCACCCCCGAGCCCACCGGTCCTCCCTCTCATCGGCCATCTCCATCTCCTCACCCCAGTCCTGGTCACCTCATTCCAAACCCTAGCTCGCCGTTATGGCCCCCTCATCGAGCTCCGACTCGGCTTTTCAAAGTGTGTTGTCGTCTCAACAGCTACAGTTGCGAAAGAGGTTCTAAAAACTCACGAACACAACTTCCTCTCCCGACCGGAGTTCGGTGCCTCCGAGTACTTCATTTACCGAGGGTCAAAATTCGTCATGGCCCAATACGGACCCTATTGGCGATACATGAAGAAGCTAACCATGACACGACTTCTCTCGCCACCGCAGCTAGCGGTCTCAACCGCCATTCGCAGCGAAGAGGTGGCAAAACTTGTGGAAAGAATAGAGGCAAATTCAAGGGAAAATAAACCCTCAGATTTGAGATTGGAGTTTACTACTTTGACAAACAATATCATATCAAGGATGGTTTTGAGCACAAGTTGCTGTGGAGGGAAAGATGAGGCTGAAGAGATTAAGGATTTGGTGTGGAGGATCAATATGTTGGCTGGGAAGTTGAGTTTGGGGGATATTTTGGGACCTTTGAAAGTGTTTGATTTCTCTGGAAATGGAAAGAAGTTTGTGAAAACTTTGAAGAGATTCGATGGGTTGGTAGAGAGGATAATGAAGGAGCATGAAGCTGCCAATAATGGTGGTGGGGATGCTGAAACAAAAAGAGATTTGTTGGATATCTTGTTGGAGATTTACAAAGATCCAAATGCTGAGATGAAGATAACTAGAAACGATGTCAAGTCGTTCTTGCTGGACCTTTTCATGGCCGGCACCGACACAACGGCAACGGCAGTGCTATGGGCAATGGGAGAGCTTCTAAATCGTCCAGAATCAATGAAAAAGCTAAGAAAAGAGATAATATCTGTGGTTGGAAAGAAGAAGCAAATCCAAGAATGTGACCTCCCGAACCTCCCATATCTGGGAGCAGTGATGAAGGAAACACTCCGTCTCCACCCGTCGGCACCAATCATCATGAGGGAATGTTTAGATGAGTGTAACATCAATGGCTCAAAAATCAAGGCCAAAACTCGGGTGTTGGTCAACGCATACGCCGTCATGAGAGACCCAGAGTGTTGGTCAGAGCCGAACAGGTTCTTACCGGAGAGGTTTTTGGAAGGCTCCCACGAGAATATTGGTGGTCATCGGATGGAGATGAAAGGCAAGAATTTTCGTTACATTCCATTTGGGAGTGGAAAGAGAGGTTGCCCTGGATCTTCCCTTGCGTTGTTAGTTTTTCCATGTGCAATTGCGACCATGGTGCAACGATTTGATTGGAACATAGGTGGACACCATGGCAACAACGTTGATTTGACACTTGGCTCAGGATTTGCTGCAGAGATGGCGAAGCCGCTCGTCTGTTATGCAGCCCCCATTGATGGGAGTGGTTAA 1581 47.69 MKAMTSIFDNTTSPLQFWCFCFITSILLYLFLKKHLPNPKPSPPRTPAPPPSPPVLPLIGHLHLLTPVLVTSFQTLARRYGPLIELRLGFSKCVVVSTATVAKEVLKTHEHNFLSRPEFGASEYFIYRGSKFVMAQYGPYWRYMKKLTMTRLLSPPQLAVSTAIRSEEVAKLVERIEANSRENKPSDLRLEFTTLTNNIISRMVLSTSCCGGKDEAEEIKDLVWRINMLAGKLSLGDILGPLKVFDFSGNGKKFVKTLKRFDGLVERIMKEHEAANNGGGDAETKRDLLDILLEIYKDPNAEMKITRNDVKSFLLDLFMAGTDTTATAVLWAMGELLNRPESMKKLRKEIISVVGKKKQIQECDLPNLPYLGAVMKETLRLHPSAPIIMRECLDECNINGSKIKAKTRVLVNAYAVMRDPECWSEPNRFLPERFLEGSHENIGGHRMEMKGKNFRYIPFGSGKRGCPGSSLALLVFPCAIATMVQRFDWNIGGHHGNNVDLTLGSGFAAEMAKPLVCYAAPIDGSG 526
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30680197 30682085 - ClG42_10g0171700.10 Clacu10g1717 260341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1717 526 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu10g1717 526 FunFam Cytochrome P450 family protein 42 517 - -
Clacu10g1717 526 SUPERFAMILY Cytochrome P450 46 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 25 519 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Clacu10g1717 526 Pfam Cytochrome P450 50 491 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 101 122 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 Gene3D Cytochrome P450 43 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu10g1717 526 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g1249 Clacu-Chr10:25315501 Clacu10g1717 Clacu-Chr10:30680197 1.40E-113 dispersed
Clacu10g1250 Clacu-Chr10:25324106 Clacu10g1717 Clacu-Chr10:30680197 2.30E-113 dispersed
Clacu10g1717 Clacu-Chr10:30680197 Clacu06g1849 Clacu-Chr6:29002559 3.20E-78 dispersed
Clacu10g1716 Clacu-Chr10:30673031 Clacu10g1717 Clacu-Chr10:30680197 1.20E-103 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1717 - - - 0.0