Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1736 ATGGAAATCGACTCACTGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACATACAGGGGCCAGCAATACAGTCACATTTACTTTGCTCGACTCCACTTGATGAGAACGATACTCCATTCACTTGTCTCTAAGTGGAAACCAAATTTACCTGTTTGCACTGTATTGGGATTAGAGGAAGGCAAGGAATGTGTCATTGTTGGAACCGCCTACAAGCACATGAAACTTAAACCCACCATTCTGGACGAGTATTCAAAGGAGAGATCTGCCACCCCCCTTGTTAAGCCACACAACTTTATGCACCCAGATGATCATCTAGTATTGGAAGATGAAAGTGGGAGAGTAAAGCTTTCTGGGGATGTGCTTTTACCTTCTGTATATGTTACAGGGATTGTCCTTGCATTGCATGGAAAGGAAACTTGCGTTGGTGACTTTTTGGTTTTGGACATCCTAGAAGCTGGCTTGCCACCCCAGATAGAGCGGCCGCTCATATCAAGCGAAGATAAGTACGTGATTTTTGTGTCGGGCCTAAGTATTGGGAGTAGCATCTCTAATCCTCTACAGTTTCAGCTTCTTGTTGATCATATAACAGGACATTTAGGGGACGAGAAGGAACAAGGGATTGCGGCTCAAATAGTTAATGTTGTCATTTGTGGGAATTCAGTTGAAATTCCTCGAGGAATTTTAAATGGGCAGCATTTGTCTGCGAAGGACCAAACAAAGCTGATGGAACCACTTAAAGAGCTAGATATCCTATTGAATCAGCTTGCTGCAGGTTTACCTGTGGACATCATGCCGGGGTCCAGTGACCCAGCCAATTTTTCCTTGCCTCAGCAGCCTTTACACAGATGCCTTTTTCCTGGATCATCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGACAGAATGTAGATGATCTCGAGAAGTACTCAGAGGCTAAAGATAAACTTGAATTTATGGAGAGGACTTTGAGATGGAGGCATCTGGCACCAACTGCTCCAAATACTCTTGGTTGCTACCCATTCACTGATCGGGATCCTTTCCTAATTGAGAGCTGTCCTCATGTTTATTTTATTGGCAATCAGGACAATTTTGATACTCGCTTAATAAAGGGAGCTGAAGGGCAGATGGTAAGACTCATTGCAATTCCAAGATTTTGCGAGAAGGGGGTTGCCGTAGTGGAAACTCATTATCTAAAATTACCTGCTTCTAAGAAAGTGAAGCAATGTGGCCTCTGA 1317 43.2 MEIDSLKNLQRKQCTYEILDEQYKIQKETYRGQQYSHIYFARLHLMRTILHSLVSKWKPNLPVCTVLGLEEGKECVIVGTAYKHMKLKPTILDEYSKERSATPLVKPHNFMHPDDHLVLEDESGRVKLSGDVLLPSVYVTGIVLALHGKETCVGDFLVLDILEAGLPPQIERPLISSEDKYVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVNVVICGNSVEIPRGILNGQHLSAKDQTKLMEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDNFDTRLIKGAEGQMVRLIAIPRFCEKGVAVVETHYLKLPASKKVKQCGL 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30898480 30904552 + ClG42_10g0173600.10 Clacu10g1736 260360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1736 438 Gene3D - 40 164 - -
Clacu10g1736 438 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 7 420 IPR024826 GO:0006271(PANTHER)|GO:0042575(PANTHER)|GO:0043625(PANTHER)
Clacu10g1736 438 Pfam DNA polymerase alpha/epsilon subunit B 182 392 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Clacu10g1736 438 Pfam DNA polymerase delta subunit OB-fold domain 34 161 IPR040663 -
Clacu10g1736 438 CDD MPP_PolD2_C 181 420 IPR041863 -
Clacu10g1736 438 Gene3D - 169 429 - -
Clacu10g1736 438 FunFam DNA polymerase delta small subunit 169 431 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1736 K02328 - csv:101221438 816.224