Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu10g1892 | ATGGAAATTTTCTTTCTTCTTCACCCAATTGTTTTCCTTTTATTTTTCCTTCTATTTCTCTCTATAATCATCTTCCTATTGAAGCCTAAATTTCTGTGCCACTGTGAAATTTGCCAAGCTTATTTGTCCTCATCTTGGTCCAAAGATTTCTTTAACCTCTGTGATTGGTATTCCCATCTTCTCCGGCAGTCTCCGACGAAGACCATTCACATCCACGTTCTGAAGAACACGATTACGGCGAATCCCGACAACGTGGAATACATTCTCAAGACGAAATTTGAAAATTACCCAAAAGGGAAAATCTTCTCCTCGATTCTTGGCGATTTTTTGGGCCGTGGGATTTTCAATGTCGATGGGGATTTGTGGAGGTTTCAGAAGAACATGGCGATCCTCGAACTTGGTCAACAGTCGATTAGATCTTACTGTTTTGAAATTGTTTCTCAGGAGATTCATTCCCGGCTTTTGCCGCTTCTTTCGTCGGTTGCCGACGGCGGAGTTTTGGATTTGCAGGATGTGTTTAGGAGATTTGCTTTTGATAGTATTTGTAAGTTTTCATTTGGGTTGGATCCAATGTGCTTGGAGCTGTCTCTTCCGATGTCCGAATTTGCCGTCGCTTTCGATCTTGCTTCTAAGCTTTCTGCTGAAAGAGCCATGGCGGTCCCGCCGTTGATCTGGAAAATCAAGCGAATGCTCAACTTAGGGAGTGAGAGAGAATTGAAAAAAGCAATAAAGCTAATAAACATGTTGGCTCATGAAGTAATTCGACAGAGAAGAAAAATGGGATTGTCAACCCATAGGGACCTCCTTTCTCAATTCATGCGAACCGTGTCTGACGAAACTTTCTTACGAGACATTGTTGTGAGCTTTCTTTTAGCCGGTCGCGATACCATTGCCTCAGCCCTTACTAGCTTCTTCTGGGTTCTTTCCAATCATCCTACCGTAGAGTCTGCTATCCAACTTGAGGCAGACCGAATCATGGGTCCCAACTCAAACCCTACATCCTTCGACCAAATACGAAACCTCCACTACTTACAAGCCGCTATTTTTGAGTCCATGAGGCTGTATCCTCCCATTCAGTTTGACTCCAAGTTTTGCCAGAATGACGATGTTTTACCCGATGGAACTTTTGTTGGACGTGGTACTCGAGTTACTTACCATCCCTATGCTATGGGTCGAGTTGAGCAAAATTGGGGTCCAAATTGCCTCGAGTTCAAACCCGAACGGTGGCTGAAAAACGACATATTCTGCCCCGAGAACCCTTTCAAGTACCCAATTTTTCAAGGTGGTTTTCGGTTTTGTTTAGGCAAAGAAATGGCTCTTGCTGAATTGAAAATTGTAGCACTTTCCCTTATTCGTCATTTTCAAATCCAGTCCACGACACCAGGTGTCACACCACGATTCTCCCCTGGCCTCACTGCAACCTTTTGCGGTGGATTCCAAGTTTCCATTGGTAAGAAGAAGAAATGGAATTGA | 1473 | 43.65 | MEIFFLLHPIVFLLFFLLFLSIIIFLLKPKFLCHCEICQAYLSSSWSKDFFNLCDWYSHLLRQSPTKTIHIHVLKNTITANPDNVEYILKTKFENYPKGKIFSSILGDFLGRGIFNVDGDLWRFQKNMAILELGQQSIRSYCFEIVSQEIHSRLLPLLSSVADGGVLDLQDVFRRFAFDSICKFSFGLDPMCLELSLPMSEFAVAFDLASKLSAERAMAVPPLIWKIKRMLNLGSERELKKAIKLINMLAHEVIRQRRKMGLSTHRDLLSQFMRTVSDETFLRDIVVSFLLAGRDTIASALTSFFWVLSNHPTVESAIQLEADRIMGPNSNPTSFDQIRNLHYLQAAIFESMRLYPPIQFDSKFCQNDDVLPDGTFVGRGTRVTYHPYAMGRVEQNWGPNCLEFKPERWLKNDIFCPENPFKYPIFQGGFRFCLGKEMALAELKIVALSLIRHFQIQSTTPGVTPRFSPGLTATFCGGFQVSIGKKKKWN | 490 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 32508237 | 32510788 | + | ClG42_10g0189200.10 | Clacu10g1892 | 260516 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu10g1892 | 490 | PRINTS | E-class P450 group I signature | 423 | 433 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | E-class P450 group I signature | 301 | 327 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | E-class P450 group I signature | 281 | 298 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | E-class P450 group I signature | 433 | 456 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | P450 superfamily signature | 292 | 309 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | P450 superfamily signature | 346 | 357 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PRINTS | P450 superfamily signature | 433 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | SUPERFAMILY | Cytochrome P450 | 52 | 483 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | CDD | CYP86A | 65 | 468 | - | - | |
| Clacu10g1892 | 490 | Gene3D | Cytochrome P450 | 46 | 489 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu10g1892 | 490 | PANTHER | CYTOCHROME P450 | 32 | 460 | - | - | |
| Clacu10g1892 | 490 | Pfam | Cytochrome P450 | 75 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu10g1628 | Clacu-Chr10:29644869 | Clacu10g1892 | Clacu-Chr10:32508237 | 1.40E-102 | dispersed | |
| Clacu10g1629 | Clacu-Chr10:29650224 | Clacu10g1892 | Clacu-Chr10:32508237 | 3.80E-108 | dispersed | |
| Clacu10g1892 | Clacu-Chr10:32508237 | Clacu11g0946 | Clacu-Chr11:9379073 | 4.40E-74 | dispersed | |
| Clacu10g1892 | Clacu-Chr10:32508237 | Clacu01g1276 | Clacu-Chr1:22650366 | 4.80E-177 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu10g1892 | K20624 | - | csv:101207686 | 877.47 |