Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1945 ATGGTCGTCGGAAAAGAGAAGACGCCGATGGAGCAAGACAACGCCACCACTACCGCCGAGAGCGAGAGACAAAGCAAAGCGAGACTCGCCATTCTAGAGCTCGCCAACATGATCAGCGTTCCCATGTCCCTCAACGCCATCGTCCGCCTCAACGTCGCCGACGCCATCTGGCAAGAAGGTTCCAACTCTCCGCTCTCTGCCTCCGAGATCCTCGCACGCGTAGTTCCGTCGGGCGGCGACGCCGATAATCTCGAGCGCATCCTTCGTATGCTCACTAGCTACGGTGTTTTCGAGGAACATCTCAGCCCTAACTCATCTAACCGCCGGTATTCCCTCACCGACGTCGGGAAAACTCTATTCACAGATTCCGATGGCCTCTCCTACGCGCCCTACGTGCTTCAGCATCATCAGGACGCACTTATGAGAGCGTGGCCGAGAGTGCACGAGGCCGCGATTGACGCGACGACGGAGCCGTTTGTTAGAGCGAACGGCGAACCGGCGTACAGTTACTATGGGAAGAAGACGGAGATGAATGAATTGATGCAGAGAGCGATGGCTGGCGTATCGGTACCGTTCATGAAAGCTGTATTGGACGGCTACAATGGCTTCAAAGGAGTTGAGAAATTAGTCGACGTCGGCGGAAGCGCCGGCGATTGCTTGCGGATGATTTTACAGAAACATCCTCACATTAAGGAAGGGATCAACTTCGATCTGCCGGAGGTGGTGGCTAGGGCTCCTAGCATCCCCGGGGTGAGTCACGTTGGAGGTGATATGTTCAAGTCCATCCCGACCGGTGACGTTATTTTCATGAAGTGGGTTCTTTCTACGTGGACGGACGATGAATGCAAAATTATATTGGAGAACTGCTGCAAGTCTCTCCCGGCGGGAGGAAAATTGATCGCCTGTGAGCCGACATTGCCGGAGAAGACGGATGACAGTCACCGGACACGTGCTCTTTTGTCCAACGACGTATTCATCATGACCATTTACAAGGCCAAAAGTAAGCAGCGAACGGAGGAGCAGTTCCGGCAACTCGGCCTCTCCGCCGGTTTCTCCGCCCTCCGACCATTTCATATCGATTACTTCTATTGTCTCTTGGAATTCCAAAAGTGA 1113 54.0 MVVGKEKTPMEQDNATTTAESERQSKARLAILELANMISVPMSLNAIVRLNVADAIWQEGSNSPLSASEILARVVPSGGDADNLERILRMLTSYGVFEEHLSPNSSNRRYSLTDVGKTLFTDSDGLSYAPYVLQHHQDALMRAWPRVHEAAIDATTEPFVRANGEPAYSYYGKKTEMNELMQRAMAGVSVPFMKAVLDGYNGFKGVEKLVDVGGSAGDCLRMILQKHPHIKEGINFDLPEVVARAPSIPGVSHVGGDMFKSIPTGDVIFMKWVLSTWTDDECKIILENCCKSLPAGGKLIACEPTLPEKTDDSHRTRALLSNDVFIMTIYKAKSKQRTEEQFRQLGLSAGFSALRPFHIDYFYCLLEFQK 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33042971 33048327 + ClG42_10g0194500.10 Clacu10g1945 260569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1945 370 SUPERFAMILY Winged helix DNA-binding domain 26 124 IPR036390 -
Clacu10g1945 370 Pfam O-methyltransferase domain 149 352 IPR001077 GO:0008171(InterPro)
Clacu10g1945 370 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 370 IPR016461 GO:0008168(InterPro)
Clacu10g1945 370 PANTHER O-METHYLTRANSFERASE 34 351 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
Clacu10g1945 370 MobiDBLite consensus disorder prediction 1 23 - -
Clacu10g1945 370 Gene3D Vaccinia Virus protein VP39 125 370 IPR029063 -
Clacu10g1945 370 Pfam Dimerisation domain 42 92 IPR012967 GO:0046983(InterPro)
Clacu10g1945 370 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 368 IPR029063 -
Clacu10g1945 370 PIRSF O-mtase 8 370 IPR016461 GO:0008168(InterPro)
Clacu10g1945 370 Gene3D - 12 124 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1945 - - - 0.0