Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g1973 ATGGCCGCCTCAAATTCCACCTCCCCCAACCCCTTCTGGTACCAGTTGCTCTTTGGCCGGTGGTTCTCTGTTTTTGCTTCCATTCTCATCATGTCCGTCTCCGGCGCCACCTATATGTTCGGCCTCTACTCCTCCGACATCAAATCCTCCTTAGGCTACGACCAAACCACCGTCAATTTGCTCAGCTTCTTCAAGGACTTAGGCGGCAATGTCGGCGTCATCAGCGGCCTCATCAACGAGGTCGCTCCGGCCTGGATCGTTCTTCTCATCGGCGCCATCATGAACCTTTTCGGCTACACCATGATTTGGCTGGCTGTAACCAATCGGATCCCCAAGCCCCAGATCTGGCATATGTGTCTCTACATTTGTATAGGAGCTAATTCTCAGACCTTTGCTAATACAGGGGCTCTGGTAACCTCCGTCAAAAACTTCCCGGAAAGTCGTGGTAGCGTTTTGGGACTTTTGAAGGGATTCGTCGGCTTAAGCGGCGCTATTTTGTCCCAGCTTTTCCATGCCTTTTACGGCAACAACTCCAAGTCTCTTATCCTCTTAATCGCTTGGCTTCCTGCAGCCGTCTCTGTTACTTTCCTCCGTTTCGTTCGCATCATTAAGGATCTCCGGCAGCCCAACGAGCTCAAAGTTTTTTACCATATCCTTTATATTTCTCTTAGCCTTGCTGGGTCGTTAATGGTTTTGATTATTTTGCAAAATCGTCTCCGATTTCAACAAATACAATACGCGGGAAGTGTCATTGTCGTGATTGTTCTGCTTCTACTGCCTCTAGCCATTGTTTTCAGAGAGGAATTGAGTGTTTGGAAGAATAAAACCGCAGGTCCAATTTTACAATTAGAGCTAGCATCACAACAACCACTCCCACCAGTGACTTCGGTGGTGCCACCAGCGCCGCCGAGCCCTCCCTCGGGCTCTTGTTTTAAAAACACGTTTAAACCCCCAAACAGAGGAGAAGATTACACAATTCCACAAGCCATTTTCAGCATCGATATGATAATAATTTTTATCGCCACAATTTGTGGTGTCGGTGGAACATTGACGGCAATCGACAATTTGGGCCAAATCGGAGAGTCTTTAGGATACCCATCTCACAGTACCACCACATTCATCTCTCTTGTCAGCATATGGAATTACCTCGGCCGTGTAGTTTCCGGATTCGTATCAGAATATTTCTGGAAAAAGTACAAAGTCCCACGTCCTCTATTTCTCTTCGCGACACTTATTTTATCCTGCGTCGGCCATCTTCTAATCGCATTCGGAGTTCCAAATTCGCTGTATTTTTCTTCAATCATAATTGGGTTCTGCTTTGGTGCACAATGGCCGTTGATCTTCGCAATCATATCAGAAATTTTCGGGCTGAAGTACTACGCAACTCTATACAATTTGGGAGGAACGGCGAGCCCGATTGGGGCGTATATTATGAGCGTGAGAGTGGCGGGTCATTTGTACGACAAAGAGGCGCAGCGACAGATGGAGGCGGCGGGACGACGGAGAAAAATAGGAGAGGATTTGATTTGCTTGGGAGTGGAATGTTATAGAAAGGCGTTTCTTATAATCACGGCAGCGACGGTGTTGGGAGGACTTGTTTCGCTGATTTTGGTTGTTCGGACATGGAAGTTTTATAAGGGCGATATTTACAGGAAGTTCAGGGAGGAGGAAGGTGAAGAAGTAGACATGAAAATTGCCGCTCCAACAAATAGTGTGTTGACGGCCACAAAATCTGAATCTGTTTAG 1746 47.02 MAASNSTSPNPFWYQLLFGRWFSVFASILIMSVSGATYMFGLYSSDIKSSLGYDQTTVNLLSFFKDLGGNVGVISGLINEVAPAWIVLLIGAIMNLFGYTMIWLAVTNRIPKPQIWHMCLYICIGANSQTFANTGALVTSVKNFPESRGSVLGLLKGFVGLSGAILSQLFHAFYGNNSKSLILLIAWLPAAVSVTFLRFVRIIKDLRQPNELKVFYHILYISLSLAGSLMVLIILQNRLRFQQIQYAGSVIVVIVLLLLPLAIVFREELSVWKNKTAGPILQLELASQQPLPPVTSVVPPAPPSPPSGSCFKNTFKPPNRGEDYTIPQAIFSIDMIIIFIATICGVGGTLTAIDNLGQIGESLGYPSHSTTTFISLVSIWNYLGRVVSGFVSEYFWKKYKVPRPLFLFATLILSCVGHLLIAFGVPNSLYFSSIIIGFCFGAQWPLIFAIISEIFGLKYYATLYNLGGTASPIGAYIMSVRVAGHLYDKEAQRQMEAAGRRRKIGEDLICLGVECYRKAFLIITAATVLGGLVSLILVVRTWKFYKGDIYRKFREEEGEEVDMKIAAPTNSVLTATKSESV 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33252910 33254655 - ClG42_10g0197300.10 Clacu10g1973 260597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g1973 581 CDD MFS_Mch1p_like 19 530 - -
Clacu10g1973 581 Gene3D MFS general substrate transporter like domains 327 544 IPR036259 -
Clacu10g1973 581 Pfam Nodulin-like 20 265 IPR010658 -
Clacu10g1973 581 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 20 554 - GO:0016020(PANTHER)
Clacu10g1973 581 SUPERFAMILY MFS general substrate transporter 24 547 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1212 Clacu-Chr2:24605836 Clacu10g1973 Clacu-Chr10:33252910 8.10E-85 dispersed
Clacu06g1756 Clacu-Chr6:28138914 Clacu10g1973 Clacu-Chr10:33252910 2.70E-71 dispersed
Clacu06g1757 Clacu-Chr6:28143865 Clacu10g1973 Clacu-Chr10:33252910 2.90E-79 dispersed
Clacu10g1973 Clacu-Chr10:33252910 Clacu11g0925 Clacu-Chr11:8935009 4.40E-81 dispersed
Clacu10g1973 Clacu-Chr10:33252910 Clacu10g1976 Clacu-Chr10:33278980 1.30E-279 proximal
Clacu04g0263 Clacu-Chr4:8129539 Clacu10g1973 Clacu-Chr10:33252910 2.10E-160 transposed
Clacu10g1973 Clacu-Chr10:33252910 Clacu04g0993 Clacu-Chr4:24096053 2.80E-208 wgd
Clacu10g1973 Clacu-Chr10:33252910 Clacu05g2320 Clacu-Chr5:31550671 7.60E-206 wgd
Clacu10g1973 Clacu-Chr10:33252910 Clacu08g0930 Clacu-Chr8:19443626 3.90E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g1973 - - - 0.0