Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g2006 ATGGGTAAAACATGCCGATTGCTTTTTTCTGTGTTTGTCCCGCCGATTTTGGTCTACGCCTGCTATACAGTGGTTACTGCCGAGATCTGTGTTGCCGGATCCTTTTGTTGTGTGTTTTCGGTTCTCTTTGGATTGATAGAAGTTTTTTTTAGGGTTTTCGGTCTTACTTCTAAGGAGAATATGGCAACTAGAGGTCAAGGTGGTATCCAACAATTGCTTGCTGCGGAGCAAGAAGCACAACACATCGTCAATGCTGCCAGAAATGCAAAAATGGCTAGACTGAAACAAGCCAAAGAAGAGGCTGAAAAGGAAATTGCTGCATATCGCGCCCAAGTCGAGTCTGAATTCCAAAGAAAACTTGCTGAGAGTAGCGGAGATTCAGGAGCTAATGTTAAGCGGCTTGAGATCGAGACAGATGAAAAGATTTATCACCTGAAAGAAGAGTCTGCGAGAATTTCACACGACGTTGTGAACATGCTTCTGAAGCACGTGACAACCGTGAAAAATTGA 510 43.73 MGKTCRLLFSVFVPPILVYACYTVVTAEICVAGSFCCVFSVLFGLIEVFFRVFGLTSKENMATRGQGGIQQLLAAEQEAQHIVNAARNAKMARLKQAKEEAEKEIAAYRAQVESEFQRKLAESSGDSGANVKRLEIETDEKIYHLKEESARISHDVVNMLLKHVTTVKN 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33548998 33551217 + ClG42_10g0200600.10 Clacu10g2006 260630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g2006 169 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Clacu10g2006 169 Pfam Vacuolar (H+)-ATPase G subunit 66 168 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Clacu10g2006 169 Gene3D - 59 169 - -
Clacu10g2006 169 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 63 169 IPR005124 GO:0016471(PANTHER)|GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Clacu10g2006 169 Coils Coil 84 118 - -
Clacu10g2006 169 FunFam V-type proton ATPase subunit G 62 169 - -
Clacu10g2006 169 NCBIfam V-type ATPase subunit G 61 168 IPR005124 GO:0016471(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g1826 Clacu-Chr8:27505895 Clacu10g2006 Clacu-Chr10:33548998 5.10E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g2006 K02152 - csv:101216393 180.644