Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu10g2199 | ATGACTATGGCAGCTCCTCTGGCTCTTCTTTCTGTGTTCCTCCTTTTGGCTGCCCATTCAGTGCAGTCTTCATTTCCCTACCATGGATTCAACGATACAAGACTTGATCTTGAGGGAGCTTTTGTTTTGAAGCCATCTGGTGCATTGAGGCTCACCAATAGATCGCATAATGTTATCGGCCACGCGTTCTATCCATCTTCATTCCAGATGTTTGATCAAAGTTCTGACTCATTTCCGAATGTTTCATCATTCAGCACAACTTTTGTTTTTGCAATTGATCCTTCGAGCCCCGGCCAAGGCGGGTACGGCTTGGCCTTTGCCATAGCTCCATCAACCCAATTTGCAGGTGCAGACAGTGGACACTTTCTTGGATTGTTCAAATCTTCCAACAATGGTAACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGATGAAGAAAGGAACACCAAAGGAAACCATATTGGAATCAACATCAATGGCATTTCATCAGTTGCATCCAAACCTGCTTCTTATTCCGACTATGGCGAAGCTCATGAACACGACTTGCAAATGGATTCTGGTGATCCTATCATCGTTTGGATTGAATATGATGGCCCCAACAGAATGGTGAACGTTACAATAGCTCCGTGGAAGCTTAAAAGAAAACCAACAAAGTCACTCCTTTCCCGTCGGATTGAACTGAAACCTGTTCTAAAGGAAAAAATGTTCGTCGGCTTCTCGGCTTCAACCGGAGATAAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAATGAATGGACCAGCGCCTCCCCTGAATTACTCTCTTCTTCCCAACCCACCAAAAGAGCAAGATTCTCTTTCTTCACCACCCAACTCCCACTTCAAGGTTTTTATAGCAGTTATATCTGTTGTAGCCATTCTAGGAATTCTTTTCTTAGCTTTCTGGTACAGAAAAACGTGGCAAACTGAGAGGCTTGAAGATTGGGAAAGAGACTGTCCTCACAGATTCCACTACAGAGACCTTTACACAGCAACAAAAGGATTTAAAAGTAGCGAGCTAATTGGAATTGGGGGATTTGGCTCAGTGTATAAAGGTCAGATACATTCAACTGGAATTGAAATTGCAGTGAAGAGAGTAAGAAGAAACTCAGGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGTCGATTAAGACACAAGAACTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAACGATCTACTCATAGTTTACGATTATATTCCAAATGGAAGCCTCTACTCTCTTCTATATCATCCAAAAAACAACTATATATTGAATTGGAAACAAAGATTCAACATCCTCAAAGGAATTGCAGCAGGACTATTATACCTTCACGAAGAATGGGAGCAAGTAGTGATCCATCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATCCCCGATTGAGCGATTTCGGTCTAGCCAGGCAATACGACCACGACGAAGCATCACACACGACCGGCGTCGTCGGCACGATCGGCTACATAGCGCCGGAGTTGGTTCGTACAGGGAAGGCTTCGAAAAACACGGATGTGTTTGGGTATGGAGTTCTGCTTCTGGAAGTGGCGTGTGGAAGAAAACCTCTGGAATCGGAACAGTTCATATTGGTGGATTGGGTGATGGAGCAGTATGAAAGCGGAAAAATTCTTAATGCGGCTGATCCGAAGTTGAATTCAGTTTATGAGGATGAGGAGATGGAGATGGTTCTGCAATTGGGGCTTCTTTGTACTCACCAGATAGCCGAAGCTCGGCCGACGATGAGACAGGTGACGAGAATCCTTCACGGCGACGATCAAATTCCGGCGGTGGACGGCTGGGCTTGTTCTAAAAGCTACTCGAAATTTAACTCGAGAATGACTGAAGTGATTTCAGCAACTTCTTACCGTTCGTCGTCCATTGGCGATATTTCTTCAAGTTCCATAGATGCAGGCCGATAA | 2004 | 43.96 | MTMAAPLALLSVFLLLAAHSVQSSFPYHGFNDTRLDLEGAFVLKPSGALRLTNRSHNVIGHAFYPSSFQMFDQSSDSFPNVSSFSTTFVFAIDPSSPGQGGYGLAFAIAPSTQFAGADSGHFLGLFKSSNNGNTSNHIFAVEFDTVNGHDEERNTKGNHIGININGISSVASKPASYSDYGEAHEHDLQMDSGDPIIVWIEYDGPNRMVNVTIAPWKLKRKPTKSLLSRRIELKPVLKEKMFVGFSASTGDKTSSHYILGWSFAMNGPAPPLNYSLLPNPPKEQDSLSSPPNSHFKVFIAVISVVAILGILFLAFWYRKTWQTERLEDWERDCPHRFHYRDLYTATKGFKSSELIGIGGFGSVYKGQIHSTGIEIAVKRVRRNSGQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLYSLLYHPKNNYILNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNPRLSDFGLARQYDHDEASHTTGVVGTIGYIAPELVRTGKASKNTDVFGYGVLLLEVACGRKPLESEQFILVDWVMEQYESGKILNAADPKLNSVYEDEEMEMVLQLGLLCTHQIAEARPTMRQVTRILHGDDQIPAVDGWACSKSYSKFNSRMTEVISATSYRSSSIGDISSSSIDAGR | 667 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 35070479 | 35072482 | - | ClG42_10g0219900.10 | Clacu10g2199 | 260823 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu10g2199 | 667 | Pfam | Legume lectin domain | 23 | 275 | IPR001220 | GO:0030246(InterPro) | |
Clacu10g2199 | 667 | FunFam | L-type lectin-domain containing receptor kinase S.4 | 426 | 628 | - | - | |
Clacu10g2199 | 667 | CDD | STKc_IRAK | 355 | 616 | - | - | |
Clacu10g2199 | 667 | CDD | lectin_legume_LecRK_Arcelin_ConA | 24 | 267 | IPR001220 | GO:0030246(InterPro) | |
Clacu10g2199 | 667 | SUPERFAMILY | Concanavalin A-like lectins/glucanases | 24 | 282 | IPR013320 | - | |
Clacu10g2199 | 667 | ProSitePatterns | Protein kinases ATP-binding region signature. | 355 | 378 | IPR017441 | GO:0005524(InterPro) | |
Clacu10g2199 | 667 | FunFam | L-type lectin-domain containing receptor kinase V.9 | 21 | 271 | - | - | |
Clacu10g2199 | 667 | Gene3D | - | 21 | 269 | - | - | |
Clacu10g2199 | 667 | PANTHER | - | 30 | 623 | IPR050528 | GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER) | |
Clacu10g2199 | 667 | Pfam | Protein kinase domain | 350 | 613 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu10g2199 | 667 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 471 | 483 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Clacu10g2199 | 667 | ProSiteProfiles | Protein kinase domain profile. | 349 | 625 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu10g2199 | 667 | FunFam | serine/threonine-protein kinase PBS1-like | 316 | 425 | - | - | |
Clacu10g2199 | 667 | Gene3D | Phosphorylase Kinase; domain 1 | 334 | 425 | - | - | |
Clacu10g2199 | 667 | Gene3D | Transferase(Phosphotransferase) domain 1 | 426 | 635 | - | - | |
Clacu10g2199 | 667 | SMART | serkin_6 | 349 | 615 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu10g2199 | 667 | SUPERFAMILY | Protein kinase-like (PK-like) | 333 | 621 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu10g2014 | Clacu-Chr10:33622348 | Clacu10g2199 | Clacu-Chr10:35070479 | 2.10E-96 | dispersed | |
Clacu10g2102 | Clacu-Chr10:34303683 | Clacu10g2199 | Clacu-Chr10:35070479 | 4.30E-152 | dispersed | |
Clacu10g2199 | Clacu-Chr10:35070479 | Clacu07g1249 | Clacu-Chr7:27309843 | 8.70E-65 | dispersed | |
Clacu10g2199 | Clacu-Chr10:35070479 | Clacu10g2200 | Clacu-Chr10:35075347 | 2.40E-240 | tandem | |
Clacu08g0134 | Clacu-Chr8:2565546 | Clacu10g2199 | Clacu-Chr10:35070479 | 2.80E-257 | transposed | |
Clacu10g2199 | Clacu-Chr10:35070479 | Clacu11g0769 | Clacu-Chr11:7534720 | 2.10E-36 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73924 | PF00069 | Pkinase | 4.10E-51 | CL0016 | Clacu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu10g2199 | - | - | - | 0.0 |