Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g2199 ATGACTATGGCAGCTCCTCTGGCTCTTCTTTCTGTGTTCCTCCTTTTGGCTGCCCATTCAGTGCAGTCTTCATTTCCCTACCATGGATTCAACGATACAAGACTTGATCTTGAGGGAGCTTTTGTTTTGAAGCCATCTGGTGCATTGAGGCTCACCAATAGATCGCATAATGTTATCGGCCACGCGTTCTATCCATCTTCATTCCAGATGTTTGATCAAAGTTCTGACTCATTTCCGAATGTTTCATCATTCAGCACAACTTTTGTTTTTGCAATTGATCCTTCGAGCCCCGGCCAAGGCGGGTACGGCTTGGCCTTTGCCATAGCTCCATCAACCCAATTTGCAGGTGCAGACAGTGGACACTTTCTTGGATTGTTCAAATCTTCCAACAATGGTAACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGATGAAGAAAGGAACACCAAAGGAAACCATATTGGAATCAACATCAATGGCATTTCATCAGTTGCATCCAAACCTGCTTCTTATTCCGACTATGGCGAAGCTCATGAACACGACTTGCAAATGGATTCTGGTGATCCTATCATCGTTTGGATTGAATATGATGGCCCCAACAGAATGGTGAACGTTACAATAGCTCCGTGGAAGCTTAAAAGAAAACCAACAAAGTCACTCCTTTCCCGTCGGATTGAACTGAAACCTGTTCTAAAGGAAAAAATGTTCGTCGGCTTCTCGGCTTCAACCGGAGATAAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAATGAATGGACCAGCGCCTCCCCTGAATTACTCTCTTCTTCCCAACCCACCAAAAGAGCAAGATTCTCTTTCTTCACCACCCAACTCCCACTTCAAGGTTTTTATAGCAGTTATATCTGTTGTAGCCATTCTAGGAATTCTTTTCTTAGCTTTCTGGTACAGAAAAACGTGGCAAACTGAGAGGCTTGAAGATTGGGAAAGAGACTGTCCTCACAGATTCCACTACAGAGACCTTTACACAGCAACAAAAGGATTTAAAAGTAGCGAGCTAATTGGAATTGGGGGATTTGGCTCAGTGTATAAAGGTCAGATACATTCAACTGGAATTGAAATTGCAGTGAAGAGAGTAAGAAGAAACTCAGGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGTCGATTAAGACACAAGAACTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAACGATCTACTCATAGTTTACGATTATATTCCAAATGGAAGCCTCTACTCTCTTCTATATCATCCAAAAAACAACTATATATTGAATTGGAAACAAAGATTCAACATCCTCAAAGGAATTGCAGCAGGACTATTATACCTTCACGAAGAATGGGAGCAAGTAGTGATCCATCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATCCCCGATTGAGCGATTTCGGTCTAGCCAGGCAATACGACCACGACGAAGCATCACACACGACCGGCGTCGTCGGCACGATCGGCTACATAGCGCCGGAGTTGGTTCGTACAGGGAAGGCTTCGAAAAACACGGATGTGTTTGGGTATGGAGTTCTGCTTCTGGAAGTGGCGTGTGGAAGAAAACCTCTGGAATCGGAACAGTTCATATTGGTGGATTGGGTGATGGAGCAGTATGAAAGCGGAAAAATTCTTAATGCGGCTGATCCGAAGTTGAATTCAGTTTATGAGGATGAGGAGATGGAGATGGTTCTGCAATTGGGGCTTCTTTGTACTCACCAGATAGCCGAAGCTCGGCCGACGATGAGACAGGTGACGAGAATCCTTCACGGCGACGATCAAATTCCGGCGGTGGACGGCTGGGCTTGTTCTAAAAGCTACTCGAAATTTAACTCGAGAATGACTGAAGTGATTTCAGCAACTTCTTACCGTTCGTCGTCCATTGGCGATATTTCTTCAAGTTCCATAGATGCAGGCCGATAA 2004 43.96 MTMAAPLALLSVFLLLAAHSVQSSFPYHGFNDTRLDLEGAFVLKPSGALRLTNRSHNVIGHAFYPSSFQMFDQSSDSFPNVSSFSTTFVFAIDPSSPGQGGYGLAFAIAPSTQFAGADSGHFLGLFKSSNNGNTSNHIFAVEFDTVNGHDEERNTKGNHIGININGISSVASKPASYSDYGEAHEHDLQMDSGDPIIVWIEYDGPNRMVNVTIAPWKLKRKPTKSLLSRRIELKPVLKEKMFVGFSASTGDKTSSHYILGWSFAMNGPAPPLNYSLLPNPPKEQDSLSSPPNSHFKVFIAVISVVAILGILFLAFWYRKTWQTERLEDWERDCPHRFHYRDLYTATKGFKSSELIGIGGFGSVYKGQIHSTGIEIAVKRVRRNSGQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLYSLLYHPKNNYILNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNPRLSDFGLARQYDHDEASHTTGVVGTIGYIAPELVRTGKASKNTDVFGYGVLLLEVACGRKPLESEQFILVDWVMEQYESGKILNAADPKLNSVYEDEEMEMVLQLGLLCTHQIAEARPTMRQVTRILHGDDQIPAVDGWACSKSYSKFNSRMTEVISATSYRSSSIGDISSSSIDAGR 667
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 35070479 35072482 - ClG42_10g0219900.10 Clacu10g2199 260823
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g2199 667 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246(InterPro)
Clacu10g2199 667 FunFam L-type lectin-domain containing receptor kinase S.4 426 628 - -
Clacu10g2199 667 CDD STKc_IRAK 355 616 - -
Clacu10g2199 667 CDD lectin_legume_LecRK_Arcelin_ConA 24 267 IPR001220 GO:0030246(InterPro)
Clacu10g2199 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 282 IPR013320 -
Clacu10g2199 667 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Clacu10g2199 667 FunFam L-type lectin-domain containing receptor kinase V.9 21 271 - -
Clacu10g2199 667 Gene3D - 21 269 - -
Clacu10g2199 667 PANTHER - 30 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Clacu10g2199 667 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu10g2199 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Clacu10g2199 667 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu10g2199 667 FunFam serine/threonine-protein kinase PBS1-like 316 425 - -
Clacu10g2199 667 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Clacu10g2199 667 Gene3D Transferase(Phosphotransferase) domain 1 426 635 - -
Clacu10g2199 667 SMART serkin_6 349 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu10g2199 667 SUPERFAMILY Protein kinase-like (PK-like) 333 621 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g2014 Clacu-Chr10:33622348 Clacu10g2199 Clacu-Chr10:35070479 2.10E-96 dispersed
Clacu10g2102 Clacu-Chr10:34303683 Clacu10g2199 Clacu-Chr10:35070479 4.30E-152 dispersed
Clacu10g2199 Clacu-Chr10:35070479 Clacu07g1249 Clacu-Chr7:27309843 8.70E-65 dispersed
Clacu10g2199 Clacu-Chr10:35070479 Clacu10g2200 Clacu-Chr10:35075347 2.40E-240 tandem
Clacu08g0134 Clacu-Chr8:2565546 Clacu10g2199 Clacu-Chr10:35070479 2.80E-257 transposed
Clacu10g2199 Clacu-Chr10:35070479 Clacu11g0769 Clacu-Chr11:7534720 2.10E-36 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73924 PF00069 Pkinase 4.10E-51 CL0016 Clacu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g2199 - - - 0.0