Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0204 | ATGGGTAAGCTAGAACAAAGCATCGAGCTACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACGGCCTCTCGTGCTTCTGCCACTACGCTACCCTCCCAGATCTGAAACCAGACCGTGGAGCATTTCTCCCTCCAGCCATGGCACTGGTCTTACACGCAGGAAAGACAAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAATTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTATTAGAAACGCCCGATGGCCCCATATTCGAGAGTAACGCTATAGCCCGTTATGTTTCTCGCTTGAAGGCTGATAGTCCTCTCTATGGTTCATCTCTGATAGATTATGGACATATTGAACAATGGATGGATTTTGCAACATTGGAGATAGATTCTAATATTTTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTGTTACACTAGCTGACATAATCTTGACTTGCAACCTGTTCTTGGGTTTTACTAAGCTCATGACTAAGAGCTTTACCTCGGAGTTCCCACATATTGAGCGGTACTTCTGGACCTTGGTCAATCAGCCAAACTTCAAAAAAATCTTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCTGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAACCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGTGAGGGAGAGGATGAGGCACCAAAGCCAAAACCAAAAAACCCTCTTGATTTGCTACCTCCGAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGAATACAAGTACAACGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTCCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTTTATGGCTTTTCCGTGGACAAGAGATACCCAAATTCGTCTTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCAGATGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA | 1413 | 44.37 | MGKLEQSIELQNPTPLPNFIASHGLSCFCHYATLPDLKPDRGAFLPPAMALVLHAGKTNKNSFKALIAAEYNGVEVKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRLKADSPLYGSSLIDYGHIEQWMDFATLEIDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFLGFTKLMTKSFTSEFPHIERYFWTLVNQPNFKKILGEVKQAESVLPVQSVKKPDESSKQKHTDESKKEPKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1748695 | 1753744 | - | ClG42_11g0020400.10 | Clacu11g0204 | 261081 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0204 | 470 | Pfam | Glutathione S-transferase, N-terminal domain | 58 | 124 | IPR004045 | - | |
Clacu11g0204 | 470 | SFLD | Main (cytGST) | 52 | 238 | - | - | |
Clacu11g0204 | 470 | CDD | GST_N_EF1Bgamma | 51 | 125 | - | - | |
Clacu11g0204 | 470 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 135 | 263 | IPR010987 | - | |
Clacu11g0204 | 470 | CDD | GST_C_EF1Bgamma_like | 138 | 258 | - | - | |
Clacu11g0204 | 470 | Pfam | Glutathione S-transferase, C-terminal domain | 172 | 245 | IPR004046 | - | |
Clacu11g0204 | 470 | MobiDBLite | consensus disorder prediction | 269 | 310 | - | - | |
Clacu11g0204 | 470 | SFLD | Glutathione Transferase (cytosolic) | 52 | 238 | IPR040079 | - | |
Clacu11g0204 | 470 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 310 | 470 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0204 | 470 | Gene3D | Glutaredoxin | 48 | 122 | - | - | |
Clacu11g0204 | 470 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 310 | 470 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0204 | 470 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 49 | 470 | IPR044628 | GO:0004364(InterPro) | |
Clacu11g0204 | 470 | SMART | EF1G_2 | 309 | 417 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0204 | 470 | SUPERFAMILY | Thioredoxin-like | 48 | 133 | IPR036249 | - | |
Clacu11g0204 | 470 | FunFam | Elongation factor 1-gamma 1 | 310 | 470 | - | - | |
Clacu11g0204 | 470 | Pfam | Elongation factor 1 gamma, conserved domain | 309 | 417 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0204 | 470 | SUPERFAMILY | GST C-terminal domain-like | 130 | 262 | IPR036282 | - | |
Clacu11g0204 | 470 | FunFam | Elongation factor 1B gamma | 49 | 122 | - | - | |
Clacu11g0204 | 470 | Gene3D | - | 128 | 265 | - | - | |
Clacu11g0204 | 470 | MobiDBLite | consensus disorder prediction | 262 | 317 | - | - | |
Clacu11g0204 | 470 | FunFam | Elongation factor 1 gamma | 128 | 264 | - | - | |
Clacu11g0204 | 470 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 49 | 130 | IPR004045 | - | |
Clacu11g0204 | 470 | SUPERFAMILY | eEF1-gamma domain | 310 | 470 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu10g0700 | Clacu-Chr10:9867146 | Clacu11g0204 | Clacu-Chr11:1748695 | 9.20E-182 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0204 | K03233 | - | rcu:8263260 | 712.22 |