Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0204 ATGGGTAAGCTAGAACAAAGCATCGAGCTACAAAACCCTACTCCACTTCCCAACTTCATCGCCTCCCACGGCCTCTCGTGCTTCTGCCACTACGCTACCCTCCCAGATCTGAAACCAGACCGTGGAGCATTTCTCCCTCCAGCCATGGCACTGGTCTTACACGCAGGAAAGACAAATAAAAATTCTTTCAAGGCTCTCATTGCTGCAGAATACAATGGAGTCGAAGTGAAATTGGTCCCAGACTTTGAGATGGGAGTCTCAAACAAGACTCCGGAGTTTATCAAGATGAACCCTATTGGGAAGGTCCCTGTATTAGAAACGCCCGATGGCCCCATATTCGAGAGTAACGCTATAGCCCGTTATGTTTCTCGCTTGAAGGCTGATAGTCCTCTCTATGGTTCATCTCTGATAGATTATGGACATATTGAACAATGGATGGATTTTGCAACATTGGAGATAGATTCTAATATTTTGACTTGGTTTAGACCTAGAATGGGGAGAGCTGCTTATCTTCCTCCTGTCGAGGAAGCTGCAATTGCTGCATTGAAGAGAGCTTTGGGAGCTTTGAATACACACCTGGCTTCAAATACATACCTAGTTGGTCATTCTGTTACACTAGCTGACATAATCTTGACTTGCAACCTGTTCTTGGGTTTTACTAAGCTCATGACTAAGAGCTTTACCTCGGAGTTCCCACATATTGAGCGGTACTTCTGGACCTTGGTCAATCAGCCAAACTTCAAAAAAATCTTGGGTGAGGTGAAGCAGGCAGAGTCAGTTCTTCCTGTTCAATCTGTAAAGAAACCTGATGAATCTTCTAAGCAAAAGCACACGGATGAGAGTAAGAAAGAACCTAAAAAGGAAGCTGAAAAAGAGAAGCCAAAGGCTGTAGCTGGTGAGGGAGAGGATGAGGCACCAAAGCCAAAACCAAAAAACCCTCTTGATTTGCTACCTCCGAGTAAGATGATTCTGGATGAGTGGAAGCGGCTATACTCGAATACCAAAACCAACTTTCGGGAGGTTGCAATTAAAGGATTTTGGGACATGTACGATCCAGAGGGATATTCTCTTTGGTTCTGTGAATACAAGTACAACGATGAGAATACTGTTTCATTCGTGACTTTGAACAAGGTTGGTGGCTTCCTCCAGCGAATGGATCTCGCTCGTAAGTATGCTTTTGGGAAGATGTTAGTGATTGGATCAGAACCTCCATTTAAGGTGAAGGGTTTATGGCTTTTCCGTGGACAAGAGATACCCAAATTCGTCTTGGACGAGTGCTACGACATGGAACTTTATGAATGGAGGAAGGTTGATATATCAGATGAGGCACAAAAGGAACGCGTAAACCAGATGATTGAAGATCAGGAGCCTTTTGAAGGGGAGGCTTTGTTGGATGCCAAATGCTTCAAGTGA 1413 44.37 MGKLEQSIELQNPTPLPNFIASHGLSCFCHYATLPDLKPDRGAFLPPAMALVLHAGKTNKNSFKALIAAEYNGVEVKLVPDFEMGVSNKTPEFIKMNPIGKVPVLETPDGPIFESNAIARYVSRLKADSPLYGSSLIDYGHIEQWMDFATLEIDSNILTWFRPRMGRAAYLPPVEEAAIAALKRALGALNTHLASNTYLVGHSVTLADIILTCNLFLGFTKLMTKSFTSEFPHIERYFWTLVNQPNFKKILGEVKQAESVLPVQSVKKPDESSKQKHTDESKKEPKKEAEKEKPKAVAGEGEDEAPKPKPKNPLDLLPPSKMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCEYKYNDENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPKFVLDECYDMELYEWRKVDISDEAQKERVNQMIEDQEPFEGEALLDAKCFK 470
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1748695 1753744 - ClG42_11g0020400.10 Clacu11g0204 261081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0204 470 Pfam Glutathione S-transferase, N-terminal domain 58 124 IPR004045 -
Clacu11g0204 470 SFLD Main (cytGST) 52 238 - -
Clacu11g0204 470 CDD GST_N_EF1Bgamma 51 125 - -
Clacu11g0204 470 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 135 263 IPR010987 -
Clacu11g0204 470 CDD GST_C_EF1Bgamma_like 138 258 - -
Clacu11g0204 470 Pfam Glutathione S-transferase, C-terminal domain 172 245 IPR004046 -
Clacu11g0204 470 MobiDBLite consensus disorder prediction 269 310 - -
Clacu11g0204 470 SFLD Glutathione Transferase (cytosolic) 52 238 IPR040079 -
Clacu11g0204 470 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 310 470 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu11g0204 470 Gene3D Glutaredoxin 48 122 - -
Clacu11g0204 470 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 310 470 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu11g0204 470 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 49 470 IPR044628 GO:0004364(InterPro)
Clacu11g0204 470 SMART EF1G_2 309 417 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu11g0204 470 SUPERFAMILY Thioredoxin-like 48 133 IPR036249 -
Clacu11g0204 470 FunFam Elongation factor 1-gamma 1 310 470 - -
Clacu11g0204 470 Pfam Elongation factor 1 gamma, conserved domain 309 417 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Clacu11g0204 470 SUPERFAMILY GST C-terminal domain-like 130 262 IPR036282 -
Clacu11g0204 470 FunFam Elongation factor 1B gamma 49 122 - -
Clacu11g0204 470 Gene3D - 128 265 - -
Clacu11g0204 470 MobiDBLite consensus disorder prediction 262 317 - -
Clacu11g0204 470 FunFam Elongation factor 1 gamma 128 264 - -
Clacu11g0204 470 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 49 130 IPR004045 -
Clacu11g0204 470 SUPERFAMILY eEF1-gamma domain 310 470 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu10g0700 Clacu-Chr10:9867146 Clacu11g0204 Clacu-Chr11:1748695 9.20E-182 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0204 K03233 - rcu:8263260 712.22