Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0237 ATGGCTGCATCTCTCATTCGCCTCCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCGATATTGCTTGATGATACTCATTCCATGATTGGTGAACAAAATGCAGCTCCAAACAGAAACTCTGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACGGAAGTTGAGAAGATATGTCCTGGTGTTGTATCTTGTGCAGATATTCTTACTGTGGCTGCAAGAGATGCATCTTTTGCTGTCGGAGGTCCATCTTGGACAGTGAAACTTGGAAGACGAGATTCTACCACCGCAAGTAAAACTCTAGCAGAAAGTGAGCTACCAGGCTTCCAAGAAAGCCTCGACAAACTTATATCCATTTTTGAGAACAAAGGTCTTAGTGCTAGAGACATGGTTGCACTTTCAGGTTCTCACACCATAGGACAAGCCCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGATTTGCTAGTACTCGTCGTAGAAATTGTCCTACAACTGGTGGTAATGGAAATTTGGCACCACTTGATTTGGTTACACCTAACTCCTTTGACAATAACTACTTCAAAAATCTTGTGCAAAAGAAGGGATTGCTTGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAGTATTGTCACAGAGTATAGTAGGAATCCCACGACATTCAAATCAGATTTTGCAACTGCAATGATAAAAATGGGAGACATTCAACCTCTCATTGGAGTAGAAGGACAAATAAGAAAGATATGTGGTGCAGTGAACTAA 792 40.4 MAASLIRLHFHDCFVQGCDASILLDDTHSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILTVAARDASFAVGGPSWTVKLGRRDSTTASKTLAESELPGFQESLDKLISIFENKGLSARDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFASTRRRNCPTTGGNGNLAPLDLVTPNSFDNNYFKNLVQKKGLLETDQVLFNGGSTDSIVTEYSRNPTTFKSDFATAMIKMGDIQPLIGVEGQIRKICGAVN 263
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 2133028 2134011 - ClG42_11g0023700.10 Clacu11g0237 261114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0237 263 FunFam Peroxidase 108 242 - -
Clacu11g0237 263 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 237 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 SUPERFAMILY Heme-dependent peroxidases 1 263 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 Pfam Peroxidase 1 227 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 ProSiteProfiles Plant heme peroxidase family profile. 1 263 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PANTHER PEROXIDASE 72-RELATED 1 261 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 Gene3D Peroxidase, domain 2 108 242 - -
Clacu11g0237 263 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0237 263 CDD secretory_peroxidase 1 262 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu11g0237 263 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601(InterPro)
Clacu11g0237 263 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Clacu11g0237 263 Gene3D - 1 259 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu11g0237 Clacu-Chr11:2133028 Clacu11g0725 Clacu-Chr11:7114727 8.40E-96 dispersed
Clacu11g0236 Clacu-Chr11:2127974 Clacu11g0237 Clacu-Chr11:2133028 2.40E-137 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0237 K00430 - csv:116403796 480.33