Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0239 | ATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCCGATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCCTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCTAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCCCCTCCTTTGACGGCGCTCCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTTCCGCAACCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTTATACTTTCGAAAGCGGAACCGACAAATCTCTGCTACCGATAAGGCCTCGAGAACTGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTCACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGATCGTGGAGTCTGTTTCTCCGGTGAAAATGGGGTCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCTAGTTTGAATTCTGGTTCTCCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGATCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCACTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCAATGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGGCAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCACCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCATTGGAGATGCCGAGAGAATGGAAGAAAATTCGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGCACTGAACTGCTAGAAAGTTTACTAAAAATGGCGCCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGGCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTTGAGTACCTCAATCGGTCCTTCGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACCGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTGAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACCTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACGTCGAGTTTCGGAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGATGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAATGAAGACATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGGGCATTATCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTAAAGGATTTTCTTGCAATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCAAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAAGTCAGCGCTATGGTTCCTCTGATGATGATAGCTCATCTTCCTCATCTTAG | 2862 | 47.24 | MPISRLCLFLAFFPLFLSPLSAAAAAAAAAAADDRSFLLLRHHRHLLHQPFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPLTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYLYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGIVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSLSSASSPMGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTIGDAERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNLTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSKGGSKSNFSDSMNRFLGRAAEEVARVQVKEGIILSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCESQRYGSSDDDSSSSSS | 953 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2148295 | 2152550 | - | ClG42_11g0023900.10 | Clacu11g0239 | 261116 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0239 | 953 | Pfam | Formin Homology 2 Domain | 493 | 898 | IPR015425 | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 418 | 442 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 62 | 90 | - | - | |
Clacu11g0239 | 953 | PANTHER | FORMIN-RELATED | 45 | 947 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 268 | 282 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 91 | 110 | - | - | |
Clacu11g0239 | 953 | Coils | Coil | 660 | 680 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 371 | 404 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 62 | 110 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 324 | 355 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 422 | 442 | - | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 222 | 303 | - | - | |
Clacu11g0239 | 953 | Gene3D | Formin, FH2 domain | 489 | 908 | IPR042201 | - | |
Clacu11g0239 | 953 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 490 | 924 | IPR015425 | - | |
Clacu11g0239 | 953 | SMART | it6_source | 490 | 913 | IPR015425 | - | |
Clacu11g0239 | 953 | MobiDBLite | consensus disorder prediction | 381 | 399 | - | - | |
Clacu11g0239 | 953 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 427 | 911 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu03g1743 | Clacu-Chr3:31205771 | Clacu11g0239 | Clacu-Chr11:2148295 | 1.80E-105 | dispersed | |
Clacu05g1644 | Clacu-Chr5:24451291 | Clacu11g0239 | Clacu-Chr11:2148295 | 1.30E-97 | dispersed | |
Clacu07g0232 | Clacu-Chr7:2756530 | Clacu11g0239 | Clacu-Chr11:2148295 | 6.40E-166 | dispersed | |
Clacu08g1041 | Clacu-Chr8:20438740 | Clacu11g0239 | Clacu-Chr11:2148295 | 1.20E-69 | dispersed | |
Clacu11g0239 | Clacu-Chr11:2148295 | Clacu02g0858 | Clacu-Chr2:10289006 | 2.90E-98 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0239 | K28090 | - | csv:101213912 | 1361.28 |