Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0293 | ATGGCTATAGCTATGATAGCGATTGGAATCGAGTTAGAAGGTTCACTGGCTATGTCAAATTTAGCGGCCCGCGTCCACTGGCCAGCTTTCTTTCGACCCCACACTCCAAAATCTACACCGTGTGCATCCTCCATTACAGCTCTTAAACCGTTTTTTCTCTTTGTGATCCCTTCGTCATTCATATCCTTATCGCCGTCGCCGCCCATCTCCGACCAAAGTTTTTGTTCTCTCAAATTCTCTTACAAGTTTACTATACAAGCCTGTTTCACTGCGTCTTTGGTGGCGGCAGATATCATGGTTCCACAGCGCCACCACAACAGCAACGATGGCGTTTCTCAAAGGGTCAACAGCCCACGATTCTCGGGACCTATAACTCGTCGTGCACATTCCTTCAAGCGTAACAACAACAGCACTGACACTCATAGTAGTGCTAATTCAAACATCCTCAACAATAATGGGCTTAGTAGTCACCATGAGATTGATCTTCCTGTGAACTCACCCAGATCAGAAGCTTTCAGAAGCACGGTTCAAGTGGATGGCTTTGAATCTGCTTTGGAACGGAAGACAGCTCCACATGTTAGCCAGAGAAACCATGGGGGCGTTGCTGCTAAAAGTTTGTTAAATCCTGGTTTTGTTTCTCTGGACTTTAGGTTAAGGGAAAAAAGGAAATTGGGGCATTTGATGTTCATGATGTTCTGTGGTCTCTGCTTGTTTCTGGGTATTCTAAAGATCTGCATGAATGGTTGGTTTGGATCAGTCATTGAGATCAACGAATCACACCAGGATACACCTGACTCCATCAAAAGTCAAAATCAAGTGGATCAAAATTCTCATAATCTTAGGCACAAGGAAGGGGAAGCTAGTTCTGAGCGAACTCTGATGATGGAATCAGGTGTAGTTGGTAGTCAAAATGGCATGGAGCATTCAGAAATTTGGATGAAACCTGACAGCGAGAATTTTGCTCCTTGCATCGATGAGGGAAGGCGCCACAAAAAGCTTGATGCGAAGATAAACGGATACATTCTTGTAAATGCCAACGGTGGCTTGAATCAGATGAGATTTGGGATCTGTGATATGGTTGTCATTGCAAAGGTTATGAAAGCAGCGCTTGTCCTTCCTTCGCTTGATCATAAATCCTACTGGGCAGATGAAAGTGGCTTTAAAGATCTCTTCAATTGGCAACACTTTCTTGAGACTCTGGAAGACGATGTTCATATAATAGAGACACTACCACCTGCCTATGCCGAATTAGTGCCTTTCAACAAAACACCAATTTCTTGGTCCAAGATTGGTTACTATAAAGCAGAGGTCCTCCCACTGCTGAAGCAGCACAAGGCGATGTATTTTACACACACGGATTCCCGGCTGGCTAACAATGGTCTCCCAAGTTCTATACAGAAGTTGAGATGTCGTGTCAATTTCCAAGCGTTAAAATATTCGGCTCCAATTGAAGAACTGGGGAACACCTTGGTCTCTAGGATGCGACAGAATGGAAGCCCTTATATTGCTCTTCATTTGAGGTATGAGAAGGATATGCTTGCATTTACAGGCTGCAGTCATAATTTGACAACAGCGGAAGATGATGAGTTGGGTAGAATGCGTTATGAAGTTGCCCATTGGAAAGAGAAGGAAATCAACGGGACAGAGAGAAGGTTGCTCGGTGGCTGTCCACTGACCCCAAGGGAGACTTCTCTTTTGCTCAGAGGGTTGGGTTTTCCATGCAGCACCAGAATATACTTGGTAGCTGGTGAGGCTTATGGAAATGGAAGTATGCAATATCTTAAGGATGATTTCCCCAATATATATTCGCATTCTACACTCACCACAGAAGAAGAGTTGAATCCTTTCAAGAATCACCAGAACATGTTGGCTGGCATCGACTACGTTGTTGCCCTTCAAAGCGATGTTTTTATTTATACATATGATGGAAATATGGCAAAGGCAATTCAAGGTCACAGGCGTTTTGAGGGCTTCAAGAAGACCATAAGTCCAGACAAGGCGAATTTTGTCAAACTTGTTGATGAACTTGATGAAGGAAAGATATCATGGAAAAAATTCAGTTCGAAAGTGAAAGCACTTCATAAAAATCGGGCAGGGGCTCCATATCTTAGAGAAGCTGGAGAAATCCCAAAGTTGGAGGAGAGTTTTTATGCAAATCCCCTTCCAGGATGCATTTGTGATAAAACCAAAGAAAAATCTGGTGCAGAACTTAGTTGCCTTCATATCTTTCATAGCAGTGGTAGCAGGAAACTGGGGAATCTGCTGGTTCCATATCAAACATCTTTTGCTTGCAGAAGGATACTGTTGGAACAACTAAATAAAGCAAAGGCACCAATTATTCTGAAAAGAGATGGTGTCTCAACAGTCAAAACTCTCCTCACTCTCCCAATCTCCTCTCTCTCTTGCTTTTGCTCTCTCGCATTTGATGTTTCGATGGCTAACGATGATACCTCTGCAACATTTCGATGGTCGGAAGAGAGGAGAAGGGTTTTAGTGATGGATAAGAACGAAGAGACGGGGAGCCCTGGTTGGGGTACTTCACTTTTCGTACAAACCACTGAAGATGTTGCAAGAGCTGTGGCTGCTGCAGCTGCTGCTGCAACCGATGCTCGCTCTCCTCGTCCTTCTGTTATATACTCTTCAAAAGACGATGAGGGTGGCAGTCCACTTCAGAGACTGCAGCGTCAAGTTAATAAAGTGCTTAAAGGATTCTCTAGTCCTCCTCAAGTAAAAACTGCAGGAACCTACAATCCTGAAGTTCTCACTACCCAAAAGCGTCAGTGGGCGAATTTCCAGTTGCAGTACTTGGACCATCGATCTCAGAAGGAGCCAACTAGGATTTTTGAGAGTATGGTTGTTGTTGGCCTTCATCCTAATTGTGATATTCAGGCACTTCAGAGGCAGTATGCTGCAAAGAAGTCAGAAGGTTCTGGGAGATTGCGAACTGCTCTTAATAATAGTCAGAGTCAATCTCGGGTAGAACCTCATCTTGAACCACAGGTCCTATTTGTTTACCCTCCAGAGAAACAGTTACCGCTCAAGTACAAGGACCTTCTTTCATTCTGCTTTCCAGGAGGTGTGGAGGTTCACGCTGTTGAAAAAACTCCTTCCATGAGTGAGTTGAACGAGATTCTTCTTGGGCAGGAACACTTTAAGCAAAGTGATCTCTCATTTGTATTCCGCTTACAGGTTGCTGATGATTCAACATTGTACGGATGCTGTGTTTTAGTTGAAGAATTAGTGCAGAAACCATCTGGGTTGCTTTCTGTTTCTGAAAAAGCATCTTCTTACTCATCCTTGAGCCGTTACATACTAACCACACGCAGATGCTACTGTATCCTAACTCGGTTGCCATTCTTCGAATTACATTTCGGTGTATTGAATAGCATCTTCACCGAAGAAAGGCTTCAAAGATTAACAAAAGGTATTGGTGTTTTGAATTTGGAATCCACAGAGAATTTGAGCAATGAAGAAGATCTGGTGGAAGACATAGGTTGCATGTCTTTAGATCAGAGTGTAGCTGAAGATGTTCATGAGGGAAAAGAGGAATATTTTCAAAGAATGGGTGATGAAAATCAAGTTGAGCATCAAATGCTCGATGAAAATTATCAATGTCTGAAAAAGGGCATTAGTGATGATATAGTTGCCACACTTGATCCAGAACCAGAGGTAGTTACAGCCAAAATAGAATCTAGTACTGTACATAAGGAAAATCATGATATCGATGTTGATGATTTTACAAGAAACAAGCAAGCAGTTGATAGACGTTTTCCGAATGCTGTTCTACCTCTCCTTCGCTATTATCAATATGAAAGCTCTGAATCGTCCTCGAGTTTTCAGGGGTCTCCAAGTGAAGACAGAAATTTCAGAAGTGATGCTGATGACACAGAGACAGAGGAGGCATCTTTCTCTGGCCAGGATGATTCCGCGGACCTACTTGACATTCTTGAATGGGCCAAGGAAAATAAGAATGGATCATTACAAATCATATGCGAGTATTACCAGTTGCATTACCCTGCGAGGGGCTGTTCTGTTAAGTTTCATCCTTTGGAGCACCTGCATCCCTTGGAGTATTATAGATCGGGCAAAACAGTTCTACATGTTGCTGGCTCAACCATTGATCCAAGATCATGCAGTACAAGTCTTGAATTAGCAGAGGCACAAGGTGCTCTCATGGTAGAGGAGGAAGCAAATGCCTTGTCAATATGGACTGTTGCAAGCATTTGTGGTTCTTTACGCCTTGAGCATATTTTATCAATTTTAGCTGGAGCGCTGCTGGAGAAGCAGATTGTGATTGTTTGTTCTAATCTGGGTATCCTGTCAGCTTCAGTTTTATCAATTATCCCTATGATTCGTCCCTACCAGTGGCAAAGTTTGCTGATGCCAGTGTTACCAAATGACATGCTGGACTTTTTGGATGCTCCTGTTCCTTACATAGTTGGTGTGAAAAATAAAACCAGTGAAGTACAATCAAAGTTAACCAATGCCGTCTTGGTTGATGTGAACAAAAACCAGGTCAAGGCCCCAACAATACCTCAGTTGCCAAAACAGAAGGAGTTATTCTCATCATTAAGACCGTATCATGCGGAGCTAGTTGGAGAGAGTTTTTTAGGGAGAAAGAGGCCAGTGCATGAATGCACTGATGTGCAGGTTGAAGCTGCCAAGGGTTTCCTAAAAGTGCTTAGATTATACTTGGACTCTCTCTGCTCTAACCTTCGTTCACATACAATTACTAATGTACAATCAAATGATGATAAGGTATCATTACTCTTGAAGGAGAGCTTCATCGAGTCGTTCCCAAGCCGTGATCGGCCGTTTTTGAAGTTGCCTTTATTTTTATGGATTTCCGTAGAGATGTCAGAGACAAAGGGCTGGCAGACAGAAGCAGAAGAGGCAGAGAGTTGCAGTCATAATATTAGCAAAGAGAAAGAAAGGACTCAATGGCAAGAGCTGGAACATCAAGCTTTGATCTTTAAGTACATGGTCTCCGGCATTCCTGTCCCTCCTGATCTGCTTTTCACCATTAAAAGAACTTCTTTGTCTTTGGATACTCCTTTCATTTCCAGGCTCTTTCCCCACCAATATCCAGATGTTGGATGGAACTATGTGCAAATGGGTTCAGGGAGGAAAATTGATCCGGAGCCTGGAAGATGTAGAAGAACAGATGGGAAAAAATGGAGATGCTCCAAAGAAGCATACCCAGATTCTAAATATTGTGAAAGACATATGCATAGAGGTAAGAACCGTTCAAGAAAGCCTGTGGAAGTTTTGAAAACAACAACAATAACAACTGCTTTAAACTCTAATCCATCATCATCATCATCACTTACCCATAACTCCACTCATTCCTTTGCTTCACTCACCAACTCTGAAACACATCCCCATCCCCATCCTTTTCTCTATCAACATGCTTCTGCTTCTTCTGCTCATTCATCCTTACTTCCAGATTACAGGTATGTTTATGGGGGGAAGGAAGAAGATGTTGATGAACAACCCTTTGTGAGGGAAGAACAACATTCAGGGAACATGAGAGGCTTCTCTGCTTCATCCATGGAAGATTCTTGGCAGCTAACTCCTTTGACAATGAGTAGCTCTTCCTCATCTTCCAGATACAAGAATGGTTCTGCTTTAGAAGGTGATTACTCTTCTTACTTGCAGCTACAGAGCTTTGGAAAATATAATGAGATGCAGAGTAAGATGGAAAGAGAGGAACCACAGAAGATTATGCATCATTTTTTTGATGAATGGTCTGCTAAAGACAGAGAATCTTGGGTTGATTTGGATGATAAGTCATCCAACAATACTGGCGCAGTTTCTGCAACTAGGCTTTCAATGTCTATTCCTAACCATGACTTCTCCTCTATCTTCACTTCCAATAAGCATAATGAAAACTAA | 5895 | 42.61 | MAIAMIAIGIELEGSLAMSNLAARVHWPAFFRPHTPKSTPCASSITALKPFFLFVIPSSFISLSPSPPISDQSFCSLKFSYKFTIQACFTASLVAADIMVPQRHHNSNDGVSQRVNSPRFSGPITRRAHSFKRNNNSTDTHSSANSNILNNNGLSSHHEIDLPVNSPRSEAFRSTVQVDGFESALERKTAPHVSQRNHGGVAAKSLLNPGFVSLDFRLREKRKLGHLMFMMFCGLCLFLGILKICMNGWFGSVIEINESHQDTPDSIKSQNQVDQNSHNLRHKEGEASSERTLMMESGVVGSQNGMEHSEIWMKPDSENFAPCIDEGRRHKKLDAKINGYILVNANGGLNQMRFGICDMVVIAKVMKAALVLPSLDHKSYWADESGFKDLFNWQHFLETLEDDVHIIETLPPAYAELVPFNKTPISWSKIGYYKAEVLPLLKQHKAMYFTHTDSRLANNGLPSSIQKLRCRVNFQALKYSAPIEELGNTLVSRMRQNGSPYIALHLRYEKDMLAFTGCSHNLTTAEDDELGRMRYEVAHWKEKEINGTERRLLGGCPLTPRETSLLLRGLGFPCSTRIYLVAGEAYGNGSMQYLKDDFPNIYSHSTLTTEEELNPFKNHQNMLAGIDYVVALQSDVFIYTYDGNMAKAIQGHRRFEGFKKTISPDKANFVKLVDELDEGKISWKKFSSKVKALHKNRAGAPYLREAGEIPKLEESFYANPLPGCICDKTKEKSGAELSCLHIFHSSGSRKLGNLLVPYQTSFACRRILLEQLNKAKAPIILKRDGVSTVKTLLTLPISSLSCFCSLAFDVSMANDDTSATFRWSEERRRVLVMDKNEETGSPGWGTSLFVQTTEDVARAVAAAAAAATDARSPRPSVIYSSKDDEGGSPLQRLQRQVNKVLKGFSSPPQVKTAGTYNPEVLTTQKRQWANFQLQYLDHRSQKEPTRIFESMVVVGLHPNCDIQALQRQYAAKKSEGSGRLRTALNNSQSQSRVEPHLEPQVLFVYPPEKQLPLKYKDLLSFCFPGGVEVHAVEKTPSMSELNEILLGQEHFKQSDLSFVFRLQVADDSTLYGCCVLVEELVQKPSGLLSVSEKASSYSSLSRYILTTRRCYCILTRLPFFELHFGVLNSIFTEERLQRLTKGIGVLNLESTENLSNEEDLVEDIGCMSLDQSVAEDVHEGKEEYFQRMGDENQVEHQMLDENYQCLKKGISDDIVATLDPEPEVVTAKIESSTVHKENHDIDVDDFTRNKQAVDRRFPNAVLPLLRYYQYESSESSSSFQGSPSEDRNFRSDADDTETEEASFSGQDDSADLLDILEWAKENKNGSLQIICEYYQLHYPARGCSVKFHPLEHLHPLEYYRSGKTVLHVAGSTIDPRSCSTSLELAEAQGALMVEEEANALSIWTVASICGSLRLEHILSILAGALLEKQIVIVCSNLGILSASVLSIIPMIRPYQWQSLLMPVLPNDMLDFLDAPVPYIVGVKNKTSEVQSKLTNAVLVDVNKNQVKAPTIPQLPKQKELFSSLRPYHAELVGESFLGRKRPVHECTDVQVEAAKGFLKVLRLYLDSLCSNLRSHTITNVQSNDDKVSLLLKESFIESFPSRDRPFLKLPLFLWISVEMSETKGWQTEAEEAESCSHNISKEKERTQWQELEHQALIFKYMVSGIPVPPDLLFTIKRTSLSLDTPFISRLFPHQYPDVGWNYVQMGSGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVLKTTTITTALNSNPSSSSSLTHNSTHSFASLTNSETHPHPHPFLYQHASASSAHSSLLPDYRYVYGGKEEDVDEQPFVREEQHSGNMRGFSASSMEDSWQLTPLTMSSSSSSSRYKNGSALEGDYSSYLQLQSFGKYNEMQSKMEREEPQKIMHHFFDEWSAKDRESWVDLDDKSSNNTGAVSATRLSMSIPNHDFSSIFTSNKHNEN | 1964 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2672614 | 2691079 | + | ClG42_11g0029300.10 | Clacu11g0293 | 261170 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0293 | 1964 | ProSiteProfiles | Tripartite DENN domain profile. | 981 | 1644 | IPR037516 | - | |
Clacu11g0293 | 1964 | Gene3D | - | 936 | 1143 | - | - | |
Clacu11g0293 | 1964 | ProSiteProfiles | WRC domain profile. | 1712 | 1756 | IPR014977 | - | |
Clacu11g0293 | 1964 | Pfam | QLQ | 1646 | 1675 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 1763 | 1800 | - | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 261 | 288 | - | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 1274 | 1305 | - | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 1763 | 1795 | - | - | |
Clacu11g0293 | 1964 | CDD | O-FucT_plant | 340 | 661 | IPR024709 | - | |
Clacu11g0293 | 1964 | Pfam | DENN (AEX-3) domain | 1404 | 1503 | IPR001194 | - | |
Clacu11g0293 | 1964 | Gene3D | - | 1401 | 1566 | IPR043153 | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 105 | 148 | - | - | |
Clacu11g0293 | 1964 | PANTHER | OS02G0726500 PROTEIN-RELATED | 232 | 732 | - | GO:0005737(PANTHER)|GO:0005794(PANTHER)|GO:0009507(PANTHER) | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 128 | 148 | - | - | |
Clacu11g0293 | 1964 | SMART | DENN_cls | 1106 | 1504 | IPR001194 | - | |
Clacu11g0293 | 1964 | ProSiteProfiles | QLQ domain profile. | 1642 | 1677 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Clacu11g0293 | 1964 | Pfam | GDP-fucose protein O-fucosyltransferase | 340 | 655 | IPR019378 | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 261 | 276 | - | - | |
Clacu11g0293 | 1964 | FunFam | O-fucosyltransferase 28 | 471 | 665 | - | - | |
Clacu11g0293 | 1964 | MobiDBLite | consensus disorder prediction | 105 | 120 | - | - | |
Clacu11g0293 | 1964 | Pfam | WRC | 1713 | 1755 | IPR014977 | - | |
Clacu11g0293 | 1964 | SMART | QLQ_2 | 1646 | 1677 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Clacu11g0293 | 1964 | Pfam | uDENN domain | 999 | 1076 | IPR005113 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu07g1409 | Clacu-Chr7:28921197 | Clacu11g0293 | Clacu-Chr11:2672614 | 9.10E-49 | dispersed | |
Clacu08g1831 | Clacu-Chr8:27567003 | Clacu11g0293 | Clacu-Chr11:2672614 | 4.40E-29 | dispersed | |
Clacu10g1901 | Clacu-Chr10:32642736 | Clacu11g0293 | Clacu-Chr11:2672614 | 9.20E-28 | dispersed | |
Clacu10g2140 | Clacu-Chr10:34572962 | Clacu11g0293 | Clacu-Chr11:2672614 | 1.60E-169 | dispersed | |
Clacu11g0293 | Clacu-Chr11:2672614 | Clacu11g0789 | Clacu-Chr11:7786924 | 4.70E-159 | dispersed | |
Clacu06g0139 | Clacu-Chr6:1560168 | Clacu11g0293 | Clacu-Chr11:2672614 | 1.10E-129 | transposed | |
Clacu10g1255 | Clacu-Chr10:25398630 | Clacu11g0293 | Clacu-Chr11:2672614 | 3.60E-75 | transposed | |
Clacu11g0293 | Clacu-Chr11:2672614 | Clacu03g1560 | Clacu-Chr3:29192074 | 1.30E-76 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48598 | PF10250 | O-FucT | 3.60E-69 | CL0113 | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0293 | - | - | - | 0.0 |