Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0393 | ATGAAGAGCGATACCCATTTCAACATTCATCTTTTCTTACATTTTTTCCTCTTCTTTGGCACTTTTCTTTTGTGCCTTTCTTCTTCTTCTTCTTCTGTTTCTGAAGAGTTTCTTCAAGTTTCCAGCCATGGCGGCCGAGGCCTTACTGACGCTGAAGCTCATTACATCCGTCAACGTCAACTCCTTTACTACAGAGATGAATTTGGCGACCGTGGTGAAGAAGTCGTCGTCGATCCTAAGCTTGTTTTTGAAAATGACAGAATCAGAAATGCTTACATAGCATTACAAGCTTGGAAGCAAGCGATTCTGTCTGACCCTTCAAATCTCACTCGGAATTGGGTTGGATCTGATGTTTGTCATTACACAGGGGTTTTCTGTGCTCCGGCGCCGGATAATTCATCGATCCGTACAGTTGCCGGAATTGACCTCAACCACGGCGACATTGCCGGGTACTTGCCGGAGGAGCTTGGTCTTCTTGTGGATCTTGCATTGTTCCATATAAACTCTAATCGGTTCTGTGGGACTGTTCCTCACAAGTTCAAGAACCTGAAGAGGCTGTTCGAGTTGGATCTGAGTAACAATCGCTTCGCCGGAAAATTCCCTCGGGTGGTTCTTGAGTTGCCGGAGCTGAAGTTTTTGGATCTGAGGTTCAACGAGTTTGAAGGGACTGTACCTAAGGAGCTTTTCGATAAGGATTTGGACGCCATTTTCATCAACCATAACAGATTCCGGTTCGAGTTACCGGAAAATTTCGGGAACTCGCCGGTTTCGGTTATTGTTCTTGCTAATAACAAATTTCATGGGTGTGTGCCGGGAAGCATTGGGAATATGTCCAGATTGAATGAGATTATTCTGATGAATAATGGGTTTCGATCGTGTTTGCCGTCGGAGATTGGGTTTCTGAAGAATCTGACGGTGTTTGATGTGAGTTTTAATGAATTTTTTGGGAGTTTGCCGGAGACGATAGGTGGAATGGTGAGTTTGGAGCAGCTGAATGTGGCGCATAATTTCTTGTCTGGAAAGATTCCGGAGAGTATCTGTAAATTGCCGAATCTGCAGAACTTTACTTACTCTTATAATTTCTTTACGGGAGAGGCGCCGTCGTGCTTGGCGTTGCCGGATTTTGATGACCGGAGGAACTGTATACCGAAGCGGCCGGTGCAACGTTCTGAGAGGCAATGTAAGTCGTTCTTGTCTAAGCCTGTGGATTGCAGTTCTTTTGGATGTCCTTCTTATGTTGCTCCGTCGCCACCTGTGGTGGTGCCTTCTCCGCCACCTGTTGTTGTCCCATCGCCATCGCCACCTGTTTTCTCTCCTCCGCCACCTGAATCCGCTTCACATCCCATTTACCGGCCACTCCCTCCGCCACCGCCATCCCCATCTCCTCCTCCCCCACCTGTTTACTCTCCTCCTCCGCCTCCACCATCCCCGCCACCCCCGTCTCCACCACCCCCACCACCGCCAGTTTACTCTCCACCCCCACCTCCCCCGTCTCCTCCTCCGCCTTCTCCACCACCACCTTCCCCACCCCCACCATCACCCCCACCGCCGCCCCCACCGGTTTACTCTCCACCTCCACCTCCACCATCACCACCCCCACCATCTCCACCGCCACCACCACCACCGGTTTACTCTCCGCCACCACCTCCACCATCTCCTCCTCCGCCGTCTCCTCCCCCACCATCGCCACCACCGGCGCCGGTGTATTGCGTCCGACCATCACCCCCACCTCCACCACCGAACTCTCCCCCACCTCCTCCTCCCTTGTTCTCTCCACCCCCACCTGTTTACTACTACAATTCACCGCCCCCGCCCAACTCTCCACCACCTCCGCCATTGTACTCTCCTCCACCACCGCCCAACTCGCCGCCTCCTCCGCCACATTCACCTCCACCACCAATCTATCCTTACTTATCTCCCCCACCTCCTCCACCTGTCTATTCTCCCCCTCCACCGGTCTATTCACCGCCCCCACCACCGCCGTGTATAGAGCCTCCCCCACCTCCACCGCCACCGTGTATAGAGTATCATGAACCCCCACCCCCACCATCACCCTCACCACCTCCGCCCATCCAATACCATCCTCCGCCGTCTCCTTCACCCCCACCCCCACCTGCACCGACCCCAGTTTACCATTCACCTCCTCCGCCGGTTTATCACTCTCCACCACCACCACCATCACCGTCGCCTCCTCCGCCACCTGCATCCCCACCACCATCACCTGTATACGAAGGCCCATTGCCACCAATCTATGGAGTTTCGTACGCCTCTCCTCCACCTCCACCCTTCTATTGA | 2295 | 53.46 | MKSDTHFNIHLFLHFFLFFGTFLLCLSSSSSSVSEEFLQVSSHGGRGLTDAEAHYIRQRQLLYYRDEFGDRGEEVVVDPKLVFENDRIRNAYIALQAWKQAILSDPSNLTRNWVGSDVCHYTGVFCAPAPDNSSIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHINSNRFCGTVPHKFKNLKRLFELDLSNNRFAGKFPRVVLELPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFRFELPENFGNSPVSVIVLANNKFHGCVPGSIGNMSRLNEIILMNNGFRSCLPSEIGFLKNLTVFDVSFNEFFGSLPETIGGMVSLEQLNVAHNFLSGKIPESICKLPNLQNFTYSYNFFTGEAPSCLALPDFDDRRNCIPKRPVQRSERQCKSFLSKPVDCSSFGCPSYVAPSPPVVVPSPPPVVVPSPSPPVFSPPPPESASHPIYRPLPPPPPSPSPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPPPPVYSPPPPPPSPPPPSPPPPSPPPAPVYCVRPSPPPPPPNSPPPPPPLFSPPPPVYYYNSPPPPNSPPPPPLYSPPPPPNSPPPPPHSPPPPIYPYLSPPPPPPVYSPPPPVYSPPPPPPCIEPPPPPPPPCIEYHEPPPPPSPSPPPPIQYHPPPSPSPPPPPAPTPVYHSPPPPVYHSPPPPPSPSPPPPPASPPPSPVYEGPLPPIYGVSYASPPPPPFY | 764 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 3618939 | 3621233 | + | ClG42_11g0039300.10 | Clacu11g0393 | 261270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0393 | 764 | PRINTS | Proline rich extensin signature | 410 | 426 | - | - | |
Clacu11g0393 | 764 | PRINTS | Proline rich extensin signature | 432 | 444 | - | - | |
Clacu11g0393 | 764 | PRINTS | Proline rich extensin signature | 444 | 465 | - | - | |
Clacu11g0393 | 764 | PRINTS | Proline rich extensin signature | 471 | 487 | - | - | |
Clacu11g0393 | 764 | SUPERFAMILY | L domain-like | 92 | 372 | - | - | |
Clacu11g0393 | 764 | MobiDBLite | consensus disorder prediction | 429 | 586 | - | - | |
Clacu11g0393 | 764 | FunFam | Leucine-rich repeat extensin-like protein 1 | 92 | 253 | - | - | |
Clacu11g0393 | 764 | PANTHER | LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED | 25 | 528 | IPR051582 | - | |
Clacu11g0393 | 764 | MobiDBLite | consensus disorder prediction | 604 | 631 | - | - | |
Clacu11g0393 | 764 | MobiDBLite | consensus disorder prediction | 673 | 750 | - | - | |
Clacu11g0393 | 764 | Pfam | Leucine rich repeat N-terminal domain | 94 | 126 | IPR013210 | - | |
Clacu11g0393 | 764 | Gene3D | Ribonuclease Inhibitor | 92 | 252 | IPR032675 | - | |
Clacu11g0393 | 764 | Pfam | Leucine rich repeat | 164 | 219 | IPR001611 | GO:0005515(InterPro) | |
Clacu11g0393 | 764 | FunFam | Leucine-rich repeat extensin-like protein 5 | 254 | 393 | - | - | |
Clacu11g0393 | 764 | Pfam | Leucine Rich Repeat | 327 | 349 | IPR001611 | GO:0005515(InterPro) | |
Clacu11g0393 | 764 | Pfam | Leucine Rich Repeat | 303 | 325 | IPR001611 | GO:0005515(InterPro) | |
Clacu11g0393 | 764 | Gene3D | Ribonuclease Inhibitor | 253 | 396 | IPR032675 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g0352 | Clacu-Chr6:4239621 | Clacu11g0393 | Clacu-Chr11:3618939 | 4.70E-39 | dispersed | |
Clacu07g0234 | Clacu-Chr7:2774208 | Clacu11g0393 | Clacu-Chr11:3618939 | 5.40E-33 | dispersed | |
Clacu05g0563 | Clacu-Chr5:4743687 | Clacu11g0393 | Clacu-Chr11:3618939 | 2.10E-39 | transposed | |
Clacu11g0393 | Clacu-Chr11:3618939 | Clacu06g1101 | Clacu-Chr6:20726194 | 6.90E-74 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0393 | - | - | - | 0.0 |