Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0418 ATGGTGGGTTGGATTTTTTGTTGGTTTTTGTTAGTGGTGGTTCTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGAAGAATCGAAGAGCATTTTTTCCGGCAAGGAATTCGTGGCCCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCTTTCTTTTCCTAATTCTTCTCATAATATTCTCCCTCGTGTTCTTCCTTTTTATCATCACTGGAAGAAAATTTATGGGTCAAAATTTCTAGTGTGGTTTGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACTTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTTGTTAAACAGTTAGAAGGTGATGGTCTTCTAAGTCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATTATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGACATGTTGGAGAAATGGTCAGCATTAATGACGTCAGCAGATTCCGGTGAGATGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACTGAAGATGTCATCACTAGGACAGCATTTGGCTCTAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCCGGCTATAGATTCCTACCTACGAGAACAAACGTGAATTCGTGGAGACTGGATAGAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGGGAGAATTCGATCGAGACGAGCTCTAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCTTCTCCATCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAGGTACTAAGGGTGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAATGAATCGTTACGGTTATATCCGCCGACCGTCGCAACTATTCGACAAGCGAAAGTTGACGTGGAGCTTGGTGGTTACATGATTCCACGTGGCACTGAGCTATTGATTCCGATTTTAGCTGTTCATCATGATCAAACGATATGGGGTAATGATGTGAATGAATTCAATCCAGGGCGATTTGCTGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTTGGGTTCATTCCGTTCGGGTTAGGAGCTCGAACTTGCATCGGCCAAAACTTGGCTATATTGCAAGCAAAATTGGCTCTTGCACTCATACTTCAAAGATTCTCTTTTCGACTGGGACCCTCTTATCAACATTCACCAGCAGTTCAAATGCTACTTTATCCACGACATGGTGCACCTATTATTTTCCAAAAATTATCCACTCCATTAATCCATCAAGATCAACAGTCATGA 1560 42.69 MVGWIFCWFLLVVVLRAAVVLWWRPRRIEEHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDLSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSALMTSADSGEMEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRVCGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYQHSPAVQMLLYPRHGAPIIFQKLSTPLIHQDQQS 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3931952 3934916 + ClG42_11g0041800.10 Clacu11g0418 261295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0418 519 Gene3D Cytochrome P450 22 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 SUPERFAMILY Cytochrome P450 71 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 Pfam Cytochrome P450 80 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 CDD CYP734 77 502 - -
Clacu11g0418 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 500 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Clacu11g0418 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0418 519 FunFam Cytochrome P450 734A1 22 509 - -
Clacu11g0418 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2094 Clacu-Chr5:29764392 Clacu11g0418 Clacu-Chr11:3931952 9.70E-74 dispersed
Clacu05g2095 Clacu-Chr5:29769619 Clacu11g0418 Clacu-Chr11:3931952 2.30E-118 dispersed
Clacu07g0545 Clacu-Chr7:7114148 Clacu11g0418 Clacu-Chr11:3931952 1.10E-78 dispersed
Clacu11g0418 Clacu-Chr11:3931952 Clacu11g1892 Clacu-Chr11:29977647 2.80E-103 dispersed
Clacu03g1670 Clacu-Chr3:30423953 Clacu11g0418 Clacu-Chr11:3931952 2.40E-115 transposed
Clacu11g1502 Clacu-Chr11:26165401 Clacu11g0418 Clacu-Chr11:3931952 5.50E-15 transposed
Clacu11g0418 Clacu-Chr11:3931952 Clacu05g0303 Clacu-Chr5:2598447 6.00E-21 wgd
Clacu11g0418 Clacu-Chr11:3931952 Clacu05g0237 Clacu-Chr5:2036781 3.80E-23 wgd
Clacu11g0418 Clacu-Chr11:3931952 Clacu06g1164 Clacu-Chr6:22108467 6.90E-227 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0418 K15639 - csv:101208789 1002.66