Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0678 ATGGCGGTTCCCCTGGTTCAGTTCCCGATCTTCATGGCTGTCAGAGTCCTCGGGATGCTTGTGGCAGCTCTTCTGTTCATTTGGACTTTGCACTTCCGTGGAGGATTAGCACTTATCTCAGAAAACAAGGATCACATCTTCAATGTCCATCCTGTTCTTATGGTGATTGGACTTATTCTTCTTAATGGTGAAGCAATGTTAGCATACAAGACAGTTTCAGGAACCAAGAACTTTAGAAAACTAGTTCATCTTGCACTCCAATTTGTTGCATTCTTTTTAAGCCTGATTGGCATATGGGCTGCCCTGAAGTTCCACAATGACAAAGGAATCGACAACTTTTACAGTCTACATTCATGGTTGGGCTTAGTTTCTATCTTTCTGTTTGGCATCCAGTGGTCTGCAGGTTTTGTAACCTTTTGGTACCCAGGTGGCTCTAGAAACAGCAGAGCTACTCTGTTGCCATGGCACGTTTTCTTTGGCATTTACATATATGGCCTTTCAATTGCTACAACTGTTACTGGATTGTTAGAAAAAGCTACATTCCTTCAAACCAGCAAGGTAATATTGCGCTATTCGAATGAGGCCTTGCTGATAAATTCATTGGGTGTCCTCATTGTTCTCTTGGGTGGTCTCGTGATTCTGGCGGTTATTGCTCCGTCGAACGCCAAAGGTGATGTTAACAGAGGACTAGCAGAGTAG 699 43.49 MAVPLVQFPIFMAVRVLGMLVAALLFIWTLHFRGGLALISENKDHIFNVHPVLMVIGLILLNGEAMLAYKTVSGTKNFRKLVHLALQFVAFFLSLIGIWAALKFHNDKGIDNFYSLHSWLGLVSIFLFGIQWSAGFVTFWYPGGSRNSRATLLPWHVFFGIYIYGLSIATTVTGLLEKATFLQTSKVILRYSNEALLINSLGVLIVLLGGLVILAVIAPSNAKGDVNRGLAE 232
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 6565466 6567578 + ClG42_11g0067800.10 Clacu11g0678 261555
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0678 232 SMART 561_7 49 175 IPR006593 -
Clacu11g0678 232 Pfam Eukaryotic cytochrome b561 49 181 IPR006593 -
Clacu11g0678 232 ProSiteProfiles Cytochrome b561 domain profile. 13 217 IPR006593 -
Clacu11g0678 232 PANTHER CYTOCHROME B561-RELATED 1 221 IPR043205 GO:0016491(InterPro)|GO:0016491(PANTHER)
Clacu11g0678 232 FunFam Cytochrome b reductase 1 4 225 - -
Clacu11g0678 232 CDD Cyt_b561_ACYB-1_like 40 183 - -
Clacu11g0678 232 Gene3D - 2 229 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g1349 Clacu-Chr9:15731851 Clacu11g0678 Clacu-Chr11:6565466 1.20E-53 dispersed
Clacu11g0678 Clacu-Chr11:6565466 Clacu05g2505 Clacu-Chr5:33141740 1.70E-44 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0678 K08360 - csv:101212633 415.616