Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0704 | ATGAAAAGAAGAAAAAAAATTTATCAAAACCTTCTGTTTTGCAAATCAGCCGTGCGACACCCCCCTTCTCGCGAGTTTTCCCTCACCACACGCTGCGCCGCACGAAGCTTCTCCGCCCACCGCCGCCGATCGCTTGCCTCCTGGCCTCCGTCCTCGCCGCCGTCTTCGATCGCCGGCCGTCCAAGCACAGCTGGACGTTCGCCACTATTTGAAGCGACCGGAGAACTACTAGGAAAACCAAATACCATGGCGGATCTCATTCCACCACCACATAGATCGGCCAACGACTTCTTTTCCGATCCACTTGATTCTCATCCTCTCTGGTTCAAGCCCGACCTATTTCTCTCCCCGAATTTTGATTCCGAGTCCTACATATCTGAGCTTCGAACATTTGTCCCATTTGACACTCTCCGATCTCAGCTCCACTCTCATCTTTCCGCTCTGAACCGTGAGCTCATTGACTTGATCAATCGTGATTATACCGATTTTGTCAACCTGAGCACAAAGCTGGTCGATGTGGAAGCGGCAGTCGTACGAATGCGAGCTCCTTTGGTTGAACTCAGGGAGAAAATTGAGCAATTCAGGGGTTCCGTGGAGTTCTCTCTATCAGCTTTGCAGAATGGATTGCGGCAGAGATCAGAGGCAGCATCGGCCAGAGAGGTCTTGGAATTGTTGCTCGATACATTTCACGTCGTCTCGAAGGTTGAAAAACTGATCAAGGAGCTTCCAAGTGCACCTGCTGATGGCTCAAACGGAACCATGAATTTAACAGATAAAAGTGCATTAAGTAATGGTGCTTCTTTACCACACATGGAGAACGGAACAAATCTTAGAGAAACACAGAGTATGCTCTTGGAAAGAATTTCCAGTGAAATGAATCGGCTGAAATTTTACATCGCTCATGCACAGGATCTTCCCTTCATTCAAAATATGGACAAGAGGATTCAGAGTGCCAGCCTGTTGCTGGACACGAGCTTGGGACATTGTTTTGTTGATGGACTTGCACATCATGATGAAAATGCTATTTACAATTGCCTACGTGCCTATGCTGCCATAGATAACACCACAAGTGCAGAAGAAATTTTTCGCAGTACTGTTGTATCACCAGCAATTCATAAAGTTTTTCCACATGGAGTTTCTGGCATGGAGGCTGGATCATCTGATGATGATTTGGAGAATGATTACAAGCAAATGAAGCAATATATTGATAAAGACTGCAAATTTTTGTTAGAAATATCTGCTACAGAAAACTCAGGACTACATGTATTTGATTTCTTGGCTAATTCAATCCTGAAAGAGGTTCTCTCTGCTATCCAAAAGGCAAAACCAGGTGCATTTTCCCCAGGAAGACCTACTGAATTCTTAAAGAACTACAAGTCGAGCCTTGATTTCTTGGCGTACTTGGAAGGCTATTGTCCATCCAGATCTGCTGTTGCTAAATTTCGAGCTGCATCTGTGTATAATGAGTTCATGAAGCAATGGAATATTGGGGTTTATTTTTCTCTGAGGCTTCAGGAAATAGCTGGGGCTTTGGATTCGTCCCTTTCAGCACCCATTCTAACCCCCATACAAACTTCACCTTCTGGCGGGGGAAATAATCAGGATCTAACATTAAAGCAGAGTGTGATGCTTTTAGACTGTCTGACAGCATGCTGGAGAGACGATGTTCTCGTCCTTTCTTGTTCTGACAAGTTTCTTCGTCTATCTTTGCAGCTCCTTTCAAGATACTCCAACTGGTTGTCATCTGGTCTAGCTGCCCGTAAGACGGGGACAGGCTCCCATCCAGGTTCTGAATGGGCTGTAGCAGCTGCCCCAGATGATTTGATATATATAATCCATGACCTTGGTTATCTAGCCACGGTGGTAGCTGGTAATTTTTTGGAAACTGTACTTCAGCTCCTATCGTCATGCCCTGCAGATGTTCTCAATTCAGTAAAGCAGAGCATTTTGCACAGTGGAAAGTCATTGAATAATTTAATGCCCAAAGTTACTGGTGCCATAGTTGCTTCACTGGTTGAGAAGTCTGTTGAGGACTTGAGACAGCTGAAGGGTATAACAGCAACATACAGGATGACCAATAAACCACTACCTGTAAGGCATTCACCCTATGTATCAGGGTTGCTACGCCCCTTAAAGGCCTTATTGGATGGAGAGAGGGCGTCAACTTTTTTGACAACGGAAACAAGGAATGCACTGCTGATCGATGCTGTGACAGAGATTACTGCTCGTTATTATGAGCAAGCAGCTGATCTTGTTAGCTTGGCTAGGAAAACAGATTCGTCACTCCAGAAAATCCGGCAGGGAGTACAAAGACGAGCTGGAGCAAGCTCAGATGTTTCAGACCATAACATCTCTGACACTGACAAGATTTGCATGCAACTCTTTCTTGATATTCAGGAGTATGGTCGCAACCTTTCAGCCCTTGGGGTTGAAGCAGCGACACACCGCCCGCTGCTACAAAATTCCATCTCGAGAGAGAAATCGGATCACTTTGAAATGGCGGTCGCTTTCCATGATGTCAAGTCTGCAGCCGGTTTGAAAAAACTCGATGAATACTTGCTTAGTCGTAGCTACATTTCCGGGTATCAGCCTTCAAAGGATGATGTTACCGTTTATGAAGCGATCTCCAAACCCGTTTCCAGTGAATATGTTAACGTGTCTAGGTGGAGTAATCACATTGAAGCACTCTTGAGAGTTTCCGCTGTTTTTGGAGAGGGTTCTGGTGTTAAGTTTGATGCAGTTGCAACCCCACCAGCTGCAGATGCAAAGGCTGCTGATGACGATGATGACGACGACATGGACCTATTTGGTGAAGAGACCGAAGAGGAAAAGAAGGCTGCTGAAGAGCGTGCAGCTGCCATTAAGGCTTCTGCAAAGAAGAAAGAGAGTGGCAAATCATCAGTTCTGATGGACATCAAACCTTGGGATGACGAAACTGACATGAAGAAACTTGAAGAGGCTGTAAGAAGCGTTCAGATGGAAGGCTTGCTTTGGGGAGCATCGAAACTCGTCCCTGTTGGATACGGTATTAAGAAATTGCAGATAATGCTCACAATTGTTGATGACCTTGTAGCTGTGACATCGTGGCCTTCAACAAAATATAATTTCTGTTCGTCAGAACCAAAGACAGCTGGTTTCAAAGATGTTGCTGAGTTTGAGGAAGATGTTTAG | 3171 | 45.29 | MKRRKKIYQNLLFCKSAVRHPPSREFSLTTRCAARSFSAHRRRSLASWPPSSPPSSIAGRPSTAGRSPLFEATGELLGKPNTMADLIPPPHRSANDFFSDPLDSHPLWFKPDLFLSPNFDSESYISELRTFVPFDTLRSQLHSHLSALNRELIDLINRDYTDFVNLSTKLVDVEAAVVRMRAPLVELREKIEQFRGSVEFSLSALQNGLRQRSEAASAREVLELLLDTFHVVSKVEKLIKELPSAPADGSNGTMNLTDKSALSNGASLPHMENGTNLRETQSMLLERISSEMNRLKFYIAHAQDLPFIQNMDKRIQSASLLLDTSLGHCFVDGLAHHDENAIYNCLRAYAAIDNTTSAEEIFRSTVVSPAIHKVFPHGVSGMEAGSSDDDLENDYKQMKQYIDKDCKFLLEISATENSGLHVFDFLANSILKEVLSAIQKAKPGAFSPGRPTEFLKNYKSSLDFLAYLEGYCPSRSAVAKFRAASVYNEFMKQWNIGVYFSLRLQEIAGALDSSLSAPILTPIQTSPSGGGNNQDLTLKQSVMLLDCLTACWRDDVLVLSCSDKFLRLSLQLLSRYSNWLSSGLAARKTGTGSHPGSEWAVAAAPDDLIYIIHDLGYLATVVAGNFLETVLQLLSSCPADVLNSVKQSILHSGKSLNNLMPKVTGAIVASLVEKSVEDLRQLKGITATYRMTNKPLPVRHSPYVSGLLRPLKALLDGERASTFLTTETRNALLIDAVTEITARYYEQAADLVSLARKTDSSLQKIRQGVQRRAGASSDVSDHNISDTDKICMQLFLDIQEYGRNLSALGVEAATHRPLLQNSISREKSDHFEMAVAFHDVKSAAGLKKLDEYLLSRSYISGYQPSKDDVTVYEAISKPVSSEYVNVSRWSNHIEALLRVSAVFGEGSGVKFDAVATPPAADAKAADDDDDDDMDLFGEETEEEKKAAEERAAAIKASAKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSVQMEGLLWGASKLVPVGYGIKKLQIMLTIVDDLVAVTSWPSTKYNFCSSEPKTAGFKDVAEFEEDV | 1056 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6896587 | 6911833 | + | ClG42_11g0070400.10 | Clacu11g0704 | 261581 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0704 | 1056 | MobiDBLite | consensus disorder prediction | 924 | 938 | - | - | |
Clacu11g0704 | 1056 | PANTHER | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 2 | 93 | 815 | IPR009316 | GO:0006891(PANTHER)|GO:0007030(PANTHER)|GO:0007030(InterPro)|GO:0015031(InterPro)|GO:0016020(InterPro)|GO:0017119(PANTHER) | |
Clacu11g0704 | 1056 | FunFam | Elongation factor 1-beta 1 like | 959 | 1038 | - | - | |
Clacu11g0704 | 1056 | Gene3D | - | 813 | 907 | - | - | |
Clacu11g0704 | 1056 | Pfam | COG2 N-terminal | 107 | 181 | IPR024602 | - | |
Clacu11g0704 | 1056 | MobiDBLite | consensus disorder prediction | 918 | 942 | - | - | |
Clacu11g0704 | 1056 | SUPERFAMILY | eEF-1beta-like | 962 | 1027 | IPR036219 | - | |
Clacu11g0704 | 1056 | MobiDBLite | consensus disorder prediction | 44 | 64 | - | - | |
Clacu11g0704 | 1056 | FunFam | Elongation factor 1-delta 1 | 835 | 910 | - | - | |
Clacu11g0704 | 1056 | CDD | EF1B | 963 | 1024 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0704 | 1056 | Coils | Coil | 937 | 957 | - | - | |
Clacu11g0704 | 1056 | Pfam | EF-1 guanine nucleotide exchange domain | 967 | 1026 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0704 | 1056 | SMART | EF1_GNE_2 | 965 | 1055 | IPR014038 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0704 | 1056 | Pfam | COG complex component, COG2, C-terminal | 492 | 798 | IPR024603 | - | |
Clacu11g0704 | 1056 | MobiDBLite | consensus disorder prediction | 48 | 62 | - | - | |
Clacu11g0704 | 1056 | SUPERFAMILY | GST C-terminal domain-like | 840 | 901 | IPR036282 | - | |
Clacu11g0704 | 1056 | ProSitePatterns | Elongation factor 1 beta/beta'/delta chain signature 1. | 929 | 937 | IPR001326 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Clacu11g0704 | 1056 | Gene3D | - | 958 | 1042 | IPR014717 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0704 | K20289 | - | csv:101215350 | 1365.52 |