Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0725 ATGGGCGCTTCCATTCTTCGCTTGTTTTTTCATGACTGTTTCGTCAATGGATGCGACGGGTCCATTTTGTTAGATGACACGTCAAGCTTTACTGGAGAGAAAAATGCAAACCCCAATAGAAACTCAGCTAGAGGCTTTGATGTCATTGATAACATCAAAACCGCTGTCGAAAAAGCTTGTCCTGGTGTTGTTTCTTGTGCTGATATTCTCGCTATTGCTGCTCGTGACTCTGTCGTTCTCCTAGGAGGGCCAAGCTGGAATGTGAAGTTGGGAAGAAGAGACGCCACAACTGCAAGCCAATCCCAAGCCAACAGCGATATCCCCGGGCCAACTTCAACTTTAAACCAACTCAGCTCTAGATTCAGCGCTCTCGGACTCTCCAACACCGACTTGGTTGCCCTTTCAGGCGGGCACACGATCGGGCAAGCACGGTGCACGACATTTAGAGGGAGAATATACAGCAATGGCACAAACATTGAGAGTTCATTTGCAAGAACAAGGCAAAGCAATTGCCCCAATACCTCAGGAACTGGAGACAACAATTTGGCTCCTTTGGATTTGCAAACTCCAAACTCATTTGACAACAACTACTTCAAGAATCTTCTTCAAAACAAGGGCCTTCTACAATCGGATCAAGTTCTCTTCAATGGCGGATCTACAGATTCCAGTGTTCAAAATTACGCAAATGCCCCTGCTCGTTTCTTCTCTGATTTTGCTGCTGCCATGGTGAAGATGGGAGATATCAGTCCTCTTACTGGCTCCAACGGTGAAATTAGGAAGGACTGCAGGAGGGTTAACTAA 801 46.32 MGASILRLFFHDCFVNGCDGSILLDDTSSFTGEKNANPNRNSARGFDVIDNIKTAVEKACPGVVSCADILAIAARDSVVLLGGPSWNVKLGRRDATTASQSQANSDIPGPTSTLNQLSSRFSALGLSNTDLVALSGGHTIGQARCTTFRGRIYSNGTNIESSFARTRQSNCPNTSGTGDNNLAPLDLQTPNSFDNNYFKNLLQNKGLLQSDQVLFNGGSTDSSVQNYANAPARFFSDFAAAMVKMGDISPLTGSNGEIRKDCRRVN 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7114727 7115921 - ClG42_11g0072500.10 Clacu11g0725 261602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0725 266 SUPERFAMILY Heme-dependent peroxidases 1 266 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PANTHER PEROXIDASE 72-RELATED 1 265 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 FunFam Peroxidase 108 245 - -
Clacu11g0725 266 Gene3D Peroxidase, domain 2 108 245 - -
Clacu11g0725 266 Gene3D - 1 266 - -
Clacu11g0725 266 CDD secretory_peroxidase 1 265 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu11g0725 266 ProSiteProfiles Plant heme peroxidase family profile. 1 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 200 217 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 184 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 240 253 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601(InterPro)
Clacu11g0725 266 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 Pfam Peroxidase 1 229 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0725 266 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g1963 Clacu-Chr2:33158513 Clacu11g0725 Clacu-Chr11:7114727 4.20E-95 dispersed
Clacu02g1965 Clacu-Chr2:33170668 Clacu11g0725 Clacu-Chr11:7114727 1.10E-51 dispersed
Clacu02g1966 Clacu-Chr2:33185725 Clacu11g0725 Clacu-Chr11:7114727 3.00E-50 dispersed
Clacu07g0875 Clacu-Chr7:21869346 Clacu11g0725 Clacu-Chr11:7114727 1.30E-80 dispersed
Clacu11g0236 Clacu-Chr11:2127974 Clacu11g0725 Clacu-Chr11:7114727 3.20E-94 dispersed
Clacu11g0237 Clacu-Chr11:2133028 Clacu11g0725 Clacu-Chr11:7114727 8.40E-96 dispersed
Clacu11g0725 Clacu-Chr11:7114727 Clacu11g0922 Clacu-Chr11:8884020 1.20E-57 dispersed
Clacu11g0210 Clacu-Chr11:1812406 Clacu11g0725 Clacu-Chr11:7114727 8.00E-93 transposed
Clacu11g0725 Clacu-Chr11:7114727 Clacu03g0025 Clacu-Chr3:459239 2.10E-54 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0725 K00430 - csv:101218447 497.664