Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0765 ATGGTCGCGAGGTCTCTGTGGCGCGCCGGAGCGAAGGTCGCGATGGCAGCCACCGCCATGGGCGGTGGTGCTGCAGCGGCCTCCATAGCCACCTCCGACGACCCCTCTATGACTCTTAAGCTCTGCACCACCGTCCCGCTCCGCCTCGTTCGCCTTTCATACACAGTCGCTACCATCGCCGTCGATTATGAATATTCACTGTGGAGTTTGCCCGAAGGGAGTAGTGAGAGGGAGAAAGTTAAGCATGAAGTTCACCTTAGATCTGCACGTAGAATTCAAGAGTTATGCTTCAAGAATGGAGGAATATATATCAAGCTGGGTCAGCATATTGGTCAGTTGGAGTATTTGGTGCCCCAAGAATATGTCCAGATAATGAGAGAATATATGCTGAACAAATGTCCAGTATCCCCGTACAATCAAGTGTGTGAAGTGGTCAAGAGAGAGCTTGGTGAGACACCAGATAAGATCTTTTCTGAATTTAATCCTGATCCAATAGCTAGTGCTTCCCTTGCACAAGTGCATGTTGCTCGTACCCATGATGGGCAAAAAGTTGCTGTGAAGGTGCAGCATACTCATATGACAGATACTGCAGCTGCAGATCATGCTAGTGTTGCATTAATTGTGAACACCCTATATCGAGTTTTTCCTTCTGTTGATTATAGGTGGTTGGTTGATGAGATCAGTGAAAGTTTGCCAAAGGAACTTGATTTCTTAAACGAGGCCAGGAACAGTGAGAAATGTTTGGATAATTTTCGGAAGTTGTCTCCTCATATTGCGGACTATGTGTATGCTCCAAAGGTGTATTGGAACTTAAGTACCTCGAAGTTATTGACCATGGAGTTCATGGATGGTGCTCAAATAAATGATGTTAAATCCATTCAGAAGCTTGGGGTTCAACCGTCAGAAGTTGCAAAATTAGTTAGTCATGCATTTGCTGAGATGATATATAAGCATGGATTTGTACACTGTGACCCTCATGCTGCGAACTTGCTCGTCCGTCCCTTACCTACTAATAGAAGGAGCATCTTTGGCAAGAGGAAGCCACAGTTAGTACTTTTGGATCATGGGCTGTATAAAGATCTTGACTTCAACATAAGATTTAACTATGCTTCCCTATGGAAGGCCTTAATATTTTCTGATGCTGAAGCAATAAAGGAAAACAGTAAGAAATTGGGTGCTGGGGAAGATCTTTATGCGTTGTTTGCTGGAATTCTTACTATGAAACCTTGGAATCGAGTCATTGACCCAGCAGTTGACCATTTAGTCATTCAAGGAACTGACAATGAGCGTTCAGAATTACAGTCAGTCACTTTAGTAGACTCCTCACCTGGCTATCTGACAGCATTCGGCCTTTCTTTCTTCTCAGATGTATGCTTCAGAGTATTTCCCCCAAATCTCAGAGCTCCTCAGGAAATTACCACGTCCGCCGATTCTCCCTGCTCAGTTCTTATTCTCCGGCGGCGACCACTCAGAAACTCACGAGCAGCGGCGACGACCCACGCAACTAGACGTCGAGCGTTCGTCTTCTCCGGAGATGGCGACGGCCCAGACCACCGCGCAACAAAAGGGCAAAAGCATAATTTTTTACAGCTGCTGACCTCAGCAAAAGAATATACAACCTTAATTTTAGAAACGGGTCCTATTTCATTTGAGCCCAAAATTTTGGGTAAAACAATCAAGTTTCCCGCGCAACAAACCCAAACCCACGCGACGAGCGCGAGCGGCAGGATTTCTCCCTTCCGACAAGTTTCTCCTTCGGAGGACGACGAACCACCTCGCGACGACGGGTTTCCTCTGTCGGTTTGTGGTTCACGCGTCGATAACTGTCATTATCTTCCTTCCGGCGGGGCCCACCACGGCGGCCCGAGTACCCGCGACGAATGTGCAGCAGCGATTAACGTTAATGGAGTTGGAATCGATCCCAGTTCTGAAACAGATTCTGTTGAATCTGGATCCAAAGTAGAGCTACCCTTCTGGCTTGCACAAGAGCTGCATCTTAGACAAGTGGCGGTTATGGGCTTACCTTCCTGTTTTAACCAAAGAACACGGCTGGAAATTCAGGCTGATGCTGCATTTGTTGATCTACGATCTAGATGCCCATTCTTCTATGAATTTGGATGCAAGATTGCACCTCTGGTTGGCGATAGAATGATTGGTTCTTGGCTTTTATCGACGTTCAAGAGTAGGTACAAGGAAGTTCTTACCAAGGCTCACACTGCAGTATTTGCTGCAAGTTCTAAATATTTGGCACTTCTGTCAAAAGAAGAAACCAAGATGTATGAAGCAGCTCAATCCTCTATGACAGCCTTCAAAAAATGGCGAATGGGTGGGCCTAGATTCCAGAAAGCATCCTTTCTAAGCAGGAAGAGGAAGTCATCTGAGTAG 2385 46.25 MVARSLWRAGAKVAMAATAMGGGAAAASIATSDDPSMTLKLCTTVPLRLVRLSYTVATIAVDYEYSLWSLPEGSSEREKVKHEVHLRSARRIQELCFKNGGIYIKLGQHIGQLEYLVPQEYVQIMREYMLNKCPVSPYNQVCEVVKRELGETPDKIFSEFNPDPIASASLAQVHVARTHDGQKVAVKVQHTHMTDTAAADHASVALIVNTLYRVFPSVDYRWLVDEISESLPKELDFLNEARNSEKCLDNFRKLSPHIADYVYAPKVYWNLSTSKLLTMEFMDGAQINDVKSIQKLGVQPSEVAKLVSHAFAEMIYKHGFVHCDPHAANLLVRPLPTNRRSIFGKRKPQLVLLDHGLYKDLDFNIRFNYASLWKALIFSDAEAIKENSKKLGAGEDLYALFAGILTMKPWNRVIDPAVDHLVIQGTDNERSELQSVTLVDSSPGYLTAFGLSFFSDVCFRVFPPNLRAPQEITTSADSPCSVLILRRRPLRNSRAAATTHATRRRAFVFSGDGDGPDHRATKGQKHNFLQLLTSAKEYTTLILETGPISFEPKILGKTIKFPAQQTQTHATSASGRISPFRQVSPSEDDEPPRDDGFPLSVCGSRVDNCHYLPSGGAHHGGPSTRDECAAAINVNGVGIDPSSETDSVESGSKVELPFWLAQELHLRQVAVMGLPSCFNQRTRLEIQADAAFVDLRSRCPFFYEFGCKIAPLVGDRMIGSWLLSTFKSRYKEVLTKAHTAVFAASSKYLALLSKEETKMYEAAQSSMTAFKKWRMGGPRFQKASFLSRKRKSSE 794
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7491399 7505307 - ClG42_11g0076500.10 Clacu11g0765 261642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0765 794 CDD GINS_B_Psf3 623 675 - -
Clacu11g0765 794 Gene3D - 623 776 IPR038437 -
Clacu11g0765 794 SUPERFAMILY PriA/YqbF domain 627 675 - -
Clacu11g0765 794 PANTHER ABC1 FAMILY PROTEIN 47 443 IPR051130 GO:0005743(PANTHER)|GO:0007005(PANTHER)|GO:0032592(PANTHER)|GO:0055088(PANTHER)
Clacu11g0765 794 Pfam ABC1 atypical kinase-like domain 130 387 IPR004147 -
Clacu11g0765 794 CDD ADCK1-like 129 392 IPR045307 -
Clacu11g0765 794 SUPERFAMILY GINS helical bundle-like 674 775 IPR036224 -
Clacu11g0765 794 MobiDBLite consensus disorder prediction 565 596 - -
Clacu11g0765 794 CDD GINS_A_psf3 674 776 - -
Clacu11g0765 794 MobiDBLite consensus disorder prediction 565 581 - -
Clacu11g0765 794 Pfam GINS complex protein helical bundle domain 675 773 IPR021151 -
Clacu11g0765 794 SUPERFAMILY Protein kinase-like (PK-like) 134 333 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1357 Clacu-Chr5:14562382 Clacu11g0765 Clacu-Chr11:7491399 2.70E-61 dispersed
Clacu09g1075 Clacu-Chr9:10198902 Clacu11g0765 Clacu-Chr11:7491399 3.30E-25 dispersed
Clacu11g0181 Clacu-Chr11:1521852 Clacu11g0765 Clacu-Chr11:7491399 1.50E-18 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0765 K08869 - csv:101216868 796.964