Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0790 ATGGCGAAGTTCAGGGATAGGACTGAAGATTTTAAAGATGTTGTGCGGCACTGTGCTATTTCGTTAGGGTACAATGAGTCCAAGTTGGCGGTTATTATGGCATCTTTCATCATTCAGAAACCGCGGCAAAGGTCACCTTTCATCAAAGCTGCCCTGAAAACGCTTGAAAGCATTGGTGCTCTTGAAGAGTTTATGTTGAAACATCAAAAGGACTATGTAGATATGTATCGCACGACAGATCAAGAGAGAGACAATATTGAACACGAGGTAACTGCCTTCATCAAAGCATGCCAAGAACAACTTGATATCCTAAAAAACAGCATTAACGCGGATGATGCACACTCAAAGGGATGGCGTGGTCGTAGCACTGATGATTCTAATGCTGATACTATTGCACACAAACATGGGGTGGTTCTAATTTTGAGTGAGAAACTCCATTCGGTAACATCACAATTTGATAAGCTAAGAGCCATTCGGTTTCAAGATATCATAAGCAAAGCAGTACCAAGAAGAAAACTGAACCAAGTAAATAAACCACGTTCTGCCAATGCCCCTGAGTATAGTAATACAGAGCTGAGGGAACCTGATGATAATTTTGAGCATCAACCTGTCCGAGCCCAACAACTGTTGGATGATGAAACTCGTGCACTTCAGGTTGAGTTGACTAGTCTTCTTGACACAGTCCAAGAAACAGAAACTAAGATGGTAGAGATGTCTGCTCTAAATCACCTTATGTCTACACACGTTTTGCAGCAAGCACAACAAATTGAACATCTTTATGAACAGGCTGTTGAAGCTACGAAGAATGTCGAGCTTGGTAATAAAGAACTTACCCAAGCAATTCAGCGGAATAGCAACTCAAATAGTTACAATGTAAGTGGATTCCGAGGAGTGAACCATCTGCCACTTCAATTTCTCGAAGTTCCCTGCATTTTAGTTGCTGGAGCATGA 951 41.64 MAKFRDRTEDFKDVVRHCAISLGYNESKLAVIMASFIIQKPRQRSPFIKAALKTLESIGALEEFMLKHQKDYVDMYRTTDQERDNIEHEVTAFIKACQEQLDILKNSINADDAHSKGWRGRSTDDSNADTIAHKHGVVLILSEKLHSVTSQFDKLRAIRFQDIISKAVPRRKLNQVNKPRSANAPEYSNTELREPDDNFEHQPVRAQQLLDDETRALQVELTSLLDTVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSNSNSYNVSGFRGVNHLPLQFLEVPCILVAGA 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7789654 7792728 - ClG42_11g0079000.10 Clacu11g0790 261667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0790 316 PANTHER SYNTAXIN-18 1 290 - GO:0005783(PANTHER)|GO:0006890(PANTHER)|GO:0031201(PANTHER)
Clacu11g0790 316 SUPERFAMILY t-snare proteins 61 273 IPR010989 GO:0016020(InterPro)|GO:0016192(InterPro)
Clacu11g0790 316 MobiDBLite consensus disorder prediction 174 198 - -
Clacu11g0790 316 Pfam SNARE-complex protein Syntaxin-18 N-terminus 5 86 IPR019529 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0790 K08492 - csv:101207161 539.265