Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0816 | ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCGACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTATGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGATGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACTGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCAGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGAGCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAATCACGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATACAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGATGCAGTCCGAACGTGCATGCGGGCACACCGCCCGTTGTCGTCCTCGTCAGAATCGTCGGGATCTATGAGTGGCGGCCCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACATCATCACCACAACCAAAGCATTGA | 1161 | 47.2 | MAEIWFGADADPPSPPKSRPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVKEEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSSAVLSRKTTGILPLSSEHKPDRGDELSRIESRGGRVIYREGARVLGVYTTSRAIGDGCLKPYVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHRPLSSSSESSGSMSGGPDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTSSPQPKH | 386 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8067644 | 8068990 | - | ClG42_11g0081600.10 | Clacu11g0816 | 261693 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0816 | 386 | SUPERFAMILY | PP2C-like | 78 | 378 | IPR036457 | - | |
Clacu11g0816 | 386 | Gene3D | - | 69 | 382 | IPR036457 | - | |
Clacu11g0816 | 386 | MobiDBLite | consensus disorder prediction | 1 | 74 | - | - | |
Clacu11g0816 | 386 | MobiDBLite | consensus disorder prediction | 50 | 74 | - | - | |
Clacu11g0816 | 386 | ProSitePatterns | PPM-type phosphatase domain signature. | 115 | 123 | IPR000222 | GO:0043169(InterPro) | |
Clacu11g0816 | 386 | ProSiteProfiles | PPM-type phosphatase domain profile. | 79 | 377 | IPR001932 | - | |
Clacu11g0816 | 386 | FunFam | Protein phosphatase 2C 50 | 78 | 383 | - | - | |
Clacu11g0816 | 386 | Pfam | Protein phosphatase 2C | 79 | 370 | IPR001932 | - | |
Clacu11g0816 | 386 | PANTHER | PROTEIN PHOSPHATASE | 67 | 376 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Clacu11g0816 | 386 | CDD | PP2Cc | 78 | 377 | IPR001932 | - | |
Clacu11g0816 | 386 | SMART | PP2C_4 | 69 | 375 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu03g0121 | Clacu-Chr3:1363756 | Clacu11g0816 | Clacu-Chr11:8067644 | 9.90E-88 | dispersed | |
Clacu08g1154 | Clacu-Chr8:21589487 | Clacu11g0816 | Clacu-Chr11:8067644 | 3.80E-47 | dispersed | |
Clacu09g0022 | Clacu-Chr9:292164 | Clacu11g0816 | Clacu-Chr11:8067644 | 9.30E-15 | dispersed | |
Clacu11g0816 | Clacu-Chr11:8067644 | Clacu11g1011 | Clacu-Chr11:12123125 | 3.80E-20 | dispersed | |
Clacu05g1066 | Clacu-Chr5:9525063 | Clacu11g0816 | Clacu-Chr11:8067644 | 9.60E-15 | transposed | |
Clacu11g0816 | Clacu-Chr11:8067644 | Clacu03g0119 | Clacu-Chr3:1341008 | 4.70E-87 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0816 | K14497 | - | csv:101220425 | 485.723 |