Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0816 ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCGACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTATGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGATGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACTGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCAGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGAGCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAATCACGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATACAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGATGCAGTCCGAACGTGCATGCGGGCACACCGCCCGTTGTCGTCCTCGTCAGAATCGTCGGGATCTATGAGTGGCGGCCCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACATCATCACCACAACCAAAGCATTGA 1161 47.2 MAEIWFGADADPPSPPKSRPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVKEEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSSAVLSRKTTGILPLSSEHKPDRGDELSRIESRGGRVIYREGARVLGVYTTSRAIGDGCLKPYVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHRPLSSSSESSGSMSGGPDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTSSPQPKH 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8067644 8068990 - ClG42_11g0081600.10 Clacu11g0816 261693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0816 386 SUPERFAMILY PP2C-like 78 378 IPR036457 -
Clacu11g0816 386 Gene3D - 69 382 IPR036457 -
Clacu11g0816 386 MobiDBLite consensus disorder prediction 1 74 - -
Clacu11g0816 386 MobiDBLite consensus disorder prediction 50 74 - -
Clacu11g0816 386 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169(InterPro)
Clacu11g0816 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 377 IPR001932 -
Clacu11g0816 386 FunFam Protein phosphatase 2C 50 78 383 - -
Clacu11g0816 386 Pfam Protein phosphatase 2C 79 370 IPR001932 -
Clacu11g0816 386 PANTHER PROTEIN PHOSPHATASE 67 376 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Clacu11g0816 386 CDD PP2Cc 78 377 IPR001932 -
Clacu11g0816 386 SMART PP2C_4 69 375 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0121 Clacu-Chr3:1363756 Clacu11g0816 Clacu-Chr11:8067644 9.90E-88 dispersed
Clacu08g1154 Clacu-Chr8:21589487 Clacu11g0816 Clacu-Chr11:8067644 3.80E-47 dispersed
Clacu09g0022 Clacu-Chr9:292164 Clacu11g0816 Clacu-Chr11:8067644 9.30E-15 dispersed
Clacu11g0816 Clacu-Chr11:8067644 Clacu11g1011 Clacu-Chr11:12123125 3.80E-20 dispersed
Clacu05g1066 Clacu-Chr5:9525063 Clacu11g0816 Clacu-Chr11:8067644 9.60E-15 transposed
Clacu11g0816 Clacu-Chr11:8067644 Clacu03g0119 Clacu-Chr3:1341008 4.70E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0816 K14497 - csv:101220425 485.723