Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0856 | ATGCCAAAATTCGGGTCGGAGCTTCTGCTGGGTGGATCTAAACCGGAAACCACGGGGTCGAGCTCCGATCTGGCGGTTTCGTCGATTGAAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGTGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGGTACAGCTGCATAACATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCTTGTTCTGTTTGCCCAAGAGTTTACCCGACATCACGGCTACTTAGTTTACATGTGTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCCTTCAAGGGTGGGAAGAAACCTCGGAAATGGAAGTTGAGAATGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAACTACTTCGGACTTAACTCCTTCGTCAATCAGCTTTGGGCGGAGGCACACTCGAGGGTTACAATTTCTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA | 819 | 45.18 | MPKFGSELLLGGSKPETTGSSSDLAVSSIEEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKVQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQALQGWEETSEMEVENETIDGLISGVSKLTTSDLTPSSISFGRRHTRGLQFLPRAVQREKVSDSSTAGTKR | 272 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8650652 | 8652521 | - | ClG42_11g0085600.10 | Clacu11g0856 | 261733 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0856 | 272 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 115 | 136 | IPR013087 | - | |
Clacu11g0856 | 272 | PANTHER | UNCHARACTERIZED | 29 | 261 | IPR039258 | - | |
Clacu11g0856 | 272 | SMART | c2h2final6 | 113 | 136 | IPR013087 | - | |
Clacu11g0856 | 272 | SMART | c2h2final6 | 151 | 176 | IPR013087 | - | |
Clacu11g0856 | 272 | SMART | c2h2final6 | 86 | 111 | IPR013087 | - | |
Clacu11g0856 | 272 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 153 | 176 | IPR013087 | - | |
Clacu11g0856 | 272 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48637 | None | None | None | None | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0856 | - | - | - | 0.0 |