Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0856 ATGCCAAAATTCGGGTCGGAGCTTCTGCTGGGTGGATCTAAACCGGAAACCACGGGGTCGAGCTCCGATCTGGCGGTTTCGTCGATTGAAGAGTTCCCGTACTGGAAGCCTTTCCAACGGAGGTTCGATCCTGATTCTCCCTTCTTTGCCTCTGGAAATGTCGAGCGTGAAATCTTAGCCAAACAGGTTGCCTTGGATTTAACCGAAGATGAAAAGGTACAGCTGCATAACATGGCAGTTGATGCTAGCAGTGAAATCTTTTGCCCAATTGTTGGTTGCGGTGCACACTTGAAATCTCTGGATGACTTTGAAGATCATTACAATTCGCGGCATACTGCCTCTTGTTCTGTTTGCCCAAGAGTTTACCCGACATCACGGCTACTTAGTTTACATGTGTCTGAGGCGCATGACTCGTTCTTTCAAGCAAAAGTTGCTCGTGGCTATGACATGTATGAATGCCTGGTGGAAGGTTGTGGTTTGAAGTTCAAAAGCTACAAAAGCAGACAGCAGCATCTAGTGGACAAGCATAAATTTTCTGCTTCATTTGAATTCTTTAAGAAAGCTCATCCATCTAAGAAACAAAGACAGAAATTACATCGTAAACAAGCCCTTCAAGGGTGGGAAGAAACCTCGGAAATGGAAGTTGAGAATGAAACTATAGATGGCCTCATTTCAGGAGTATCTAAACTAACTACTTCGGACTTAACTCCTTCGTCAATCAGCTTTGGGCGGAGGCACACTCGAGGGTTACAATTTCTTCCTCGAGCAGTTCAGCGAGAAAAAGTGTCAGACTCCTCAACAGCTGGAACAAAGAGATGA 819 45.18 MPKFGSELLLGGSKPETTGSSSDLAVSSIEEFPYWKPFQRRFDPDSPFFASGNVEREILAKQVALDLTEDEKVQLHNMAVDASSEIFCPIVGCGAHLKSLDDFEDHYNSRHTASCSVCPRVYPTSRLLSLHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRQQHLVDKHKFSASFEFFKKAHPSKKQRQKLHRKQALQGWEETSEMEVENETIDGLISGVSKLTTSDLTPSSISFGRRHTRGLQFLPRAVQREKVSDSSTAGTKR 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8650652 8652521 - ClG42_11g0085600.10 Clacu11g0856 261733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0856 272 ProSitePatterns Zinc finger C2H2 type domain signature. 115 136 IPR013087 -
Clacu11g0856 272 PANTHER UNCHARACTERIZED 29 261 IPR039258 -
Clacu11g0856 272 SMART c2h2final6 113 136 IPR013087 -
Clacu11g0856 272 SMART c2h2final6 151 176 IPR013087 -
Clacu11g0856 272 SMART c2h2final6 86 111 IPR013087 -
Clacu11g0856 272 ProSitePatterns Zinc finger C2H2 type domain signature. 153 176 IPR013087 -
Clacu11g0856 272 MobiDBLite consensus disorder prediction 1 24 - -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48637 None None None None Clacu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0856 - - - 0.0