Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0924 ATGGGATTATTTTTTTGGAGGGGTTTAGTTTTGGCGGTGGTTGTAGTGACGGCGACGGTGGAGAGAAGGGAGGCGCAATTAGTAGAAAATTTTTATGCCTCAAGTTGCCCAAACCTAGAGCAAATAGTTACACAATCTGTTCAATCCAAGTTTGCTCAAACCTTCGTTACCATTCCTGCAACTTTGCGACTCTTCTTCCATGACTGCTTTGTTGAGGGATGTGATGGTTCAGTGATGATAGCATCTCCGAATGGGGATGCAGAGAAAGACGCTAAAGACAATGTTTCATTAGCAGGAGATGGATTTGACACGGTTGTTAAAGCAAAACAAGCAGTTGAAAATGTTTGTCCCGGTGTTGTCTCATGTGCTGACATCTTGGCTCTTGCAACTAGAGACGTGGTTAAGTTGGCTGGAGGTCCACAATACAGCGTAGAACTCGGACGTCGAGATGGGCTAATTTCCCAAGCATCTCGAGTGTCTGGAAACCTACCAGAACCATTCTTCAATCTGGACCAACTCACCACCATGTTCGCCGCCCACAACCTTACCCTCATCGACATCATCGCCCTCTCCGGAGCTCACACCCTCGGCTTCTCCCATTGTGACCGTTTTGCCAACCGCCTTTACTCGTTTTCCCCTTCGTCTCCAGTGGACCCATCGTTAGACCCCGGCTACGCTCGACAGCTAATGGATGCTTGTCCGCAAAACGTGGATCCTAGTGTGGCCATCAACATGGACCCTATAACCCCTCAGACCTTTGACAACCTTTACTACCAGAATCTTGTTGCCGGCAAGGGGCTCTTCACTGCGGACCAGATTCTGTTTACTGAGTCAGAATCGCAGCCGACGGTTCTTAGCTTTTCCACCAATGGGGCGGAGTTTAATGCAGCATTTATTAGGGCCATGACTAAGTTGGGTCGGGTCGGGGTTAAGACGGGTAATAATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA 984 48.37 MGLFFWRGLVLAVVVVTATVERREAQLVENFYASSCPNLEQIVTQSVQSKFAQTFVTIPATLRLFFHDCFVEGCDGSVMIASPNGDAEKDAKDNVSLAGDGFDTVVKAKQAVENVCPGVVSCADILALATRDVVKLAGGPQYSVELGRRDGLISQASRVSGNLPEPFFNLDQLTTMFAAHNLTLIDIIALSGAHTLGFSHCDRFANRLYSFSPSSPVDPSLDPGYARQLMDACPQNVDPSVAINMDPITPQTFDNLYYQNLVAGKGLFTADQILFTESESQPTVLSFSTNGAEFNAAFIRAMTKLGRVGVKTGNNGEIRRDCTAFNS 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8916384 8918023 + ClG42_11g0092400.10 Clacu11g0924 261801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0924 327 Pfam Peroxidase 43 289 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 Gene3D - 30 326 - -
Clacu11g0924 327 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 ProSiteProfiles Plant heme peroxidase family profile. 26 326 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 PANTHER - 12 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 FunFam Peroxidase 30 171 - -
Clacu11g0924 327 Gene3D Peroxidase, domain 2 164 305 - -
Clacu11g0924 327 FunFam Peroxidase 164 305 - -
Clacu11g0924 327 SUPERFAMILY Heme-dependent peroxidases 26 326 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu11g0924 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Clacu11g0924 327 CDD secretory_peroxidase 26 325 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g0787 Clacu-Chr3:8842214 Clacu11g0924 Clacu-Chr11:8916384 3.70E-75 dispersed
Clacu05g1913 Clacu-Chr5:28339352 Clacu11g0924 Clacu-Chr11:8916384 3.30E-102 dispersed
Clacu06g0542 Clacu-Chr6:6171730 Clacu11g0924 Clacu-Chr11:8916384 1.90E-65 dispersed
Clacu06g1778 Clacu-Chr6:28318588 Clacu11g0924 Clacu-Chr11:8916384 4.80E-72 dispersed
Clacu09g1915 Clacu-Chr9:34036628 Clacu11g0924 Clacu-Chr11:8916384 1.10E-73 dispersed
Clacu10g1450 Clacu-Chr10:27652853 Clacu11g0924 Clacu-Chr11:8916384 2.30E-71 dispersed
Clacu11g0921 Clacu-Chr11:8872742 Clacu11g0924 Clacu-Chr11:8916384 1.70E-122 dispersed
Clacu11g0924 Clacu-Chr11:8916384 Clacu01g1734 Clacu-Chr1:29503881 4.40E-54 dispersed
Clacu11g0922 Clacu-Chr11:8884020 Clacu11g0924 Clacu-Chr11:8916384 4.20E-123 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0924 K00430 - csv:101213580 573.548