Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g0924 | ATGGGATTATTTTTTTGGAGGGGTTTAGTTTTGGCGGTGGTTGTAGTGACGGCGACGGTGGAGAGAAGGGAGGCGCAATTAGTAGAAAATTTTTATGCCTCAAGTTGCCCAAACCTAGAGCAAATAGTTACACAATCTGTTCAATCCAAGTTTGCTCAAACCTTCGTTACCATTCCTGCAACTTTGCGACTCTTCTTCCATGACTGCTTTGTTGAGGGATGTGATGGTTCAGTGATGATAGCATCTCCGAATGGGGATGCAGAGAAAGACGCTAAAGACAATGTTTCATTAGCAGGAGATGGATTTGACACGGTTGTTAAAGCAAAACAAGCAGTTGAAAATGTTTGTCCCGGTGTTGTCTCATGTGCTGACATCTTGGCTCTTGCAACTAGAGACGTGGTTAAGTTGGCTGGAGGTCCACAATACAGCGTAGAACTCGGACGTCGAGATGGGCTAATTTCCCAAGCATCTCGAGTGTCTGGAAACCTACCAGAACCATTCTTCAATCTGGACCAACTCACCACCATGTTCGCCGCCCACAACCTTACCCTCATCGACATCATCGCCCTCTCCGGAGCTCACACCCTCGGCTTCTCCCATTGTGACCGTTTTGCCAACCGCCTTTACTCGTTTTCCCCTTCGTCTCCAGTGGACCCATCGTTAGACCCCGGCTACGCTCGACAGCTAATGGATGCTTGTCCGCAAAACGTGGATCCTAGTGTGGCCATCAACATGGACCCTATAACCCCTCAGACCTTTGACAACCTTTACTACCAGAATCTTGTTGCCGGCAAGGGGCTCTTCACTGCGGACCAGATTCTGTTTACTGAGTCAGAATCGCAGCCGACGGTTCTTAGCTTTTCCACCAATGGGGCGGAGTTTAATGCAGCATTTATTAGGGCCATGACTAAGTTGGGTCGGGTCGGGGTTAAGACGGGTAATAATGGTGAAATTCGAAGGGATTGCACTGCCTTTAATTCCTAA | 984 | 48.37 | MGLFFWRGLVLAVVVVTATVERREAQLVENFYASSCPNLEQIVTQSVQSKFAQTFVTIPATLRLFFHDCFVEGCDGSVMIASPNGDAEKDAKDNVSLAGDGFDTVVKAKQAVENVCPGVVSCADILALATRDVVKLAGGPQYSVELGRRDGLISQASRVSGNLPEPFFNLDQLTTMFAAHNLTLIDIIALSGAHTLGFSHCDRFANRLYSFSPSSPVDPSLDPGYARQLMDACPQNVDPSVAINMDPITPQTFDNLYYQNLVAGKGLFTADQILFTESESQPTVLSFSTNGAEFNAAFIRAMTKLGRVGVKTGNNGEIRRDCTAFNS | 327 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8916384 | 8918023 | + | ClG42_11g0092400.10 | Clacu11g0924 | 261801 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g0924 | 327 | Pfam | Peroxidase | 43 | 289 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | Gene3D | - | 30 | 326 | - | - | |
Clacu11g0924 | 327 | PRINTS | Haem peroxidase superfamily signature | 120 | 137 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Haem peroxidase superfamily signature | 138 | 150 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Haem peroxidase superfamily signature | 186 | 201 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Haem peroxidase superfamily signature | 246 | 261 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Haem peroxidase superfamily signature | 58 | 72 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | ProSiteProfiles | Plant heme peroxidase family profile. | 26 | 326 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 60 | 80 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 138 | 153 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 185 | 197 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 244 | 259 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 36 | 55 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 300 | 313 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 260 | 277 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 100 | 113 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PRINTS | Plant peroxidase signature | 119 | 129 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | PANTHER | - | 12 | 326 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | FunFam | Peroxidase | 30 | 171 | - | - | |
Clacu11g0924 | 327 | Gene3D | Peroxidase, domain 2 | 164 | 305 | - | - | |
Clacu11g0924 | 327 | FunFam | Peroxidase | 164 | 305 | - | - | |
Clacu11g0924 | 327 | SUPERFAMILY | Heme-dependent peroxidases | 26 | 326 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
Clacu11g0924 | 327 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 186 | 196 | IPR019793 | - | |
Clacu11g0924 | 327 | CDD | secretory_peroxidase | 26 | 325 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu03g0787 | Clacu-Chr3:8842214 | Clacu11g0924 | Clacu-Chr11:8916384 | 3.70E-75 | dispersed | |
Clacu05g1913 | Clacu-Chr5:28339352 | Clacu11g0924 | Clacu-Chr11:8916384 | 3.30E-102 | dispersed | |
Clacu06g0542 | Clacu-Chr6:6171730 | Clacu11g0924 | Clacu-Chr11:8916384 | 1.90E-65 | dispersed | |
Clacu06g1778 | Clacu-Chr6:28318588 | Clacu11g0924 | Clacu-Chr11:8916384 | 4.80E-72 | dispersed | |
Clacu09g1915 | Clacu-Chr9:34036628 | Clacu11g0924 | Clacu-Chr11:8916384 | 1.10E-73 | dispersed | |
Clacu10g1450 | Clacu-Chr10:27652853 | Clacu11g0924 | Clacu-Chr11:8916384 | 2.30E-71 | dispersed | |
Clacu11g0921 | Clacu-Chr11:8872742 | Clacu11g0924 | Clacu-Chr11:8916384 | 1.70E-122 | dispersed | |
Clacu11g0924 | Clacu-Chr11:8916384 | Clacu01g1734 | Clacu-Chr1:29503881 | 4.40E-54 | dispersed | |
Clacu11g0922 | Clacu-Chr11:8884020 | Clacu11g0924 | Clacu-Chr11:8916384 | 4.20E-123 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g0924 | K00430 | - | csv:101213580 | 573.548 |