Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0925 ATGGGTCGGTGGAATGAGAAACTTGTAGCCTTCATTAACAATAGATGGTTAGTTTTTGTGGCTGCAATATGGCTTCAATCATGCGCTGGAATTGGGTATCTTTTTGGAAGCATATCGCCGGTGATCAAAACCAATTTGAGTTACAATCAGAGGCAAATTGCACGTCTCGGTGTCGCGAAAGACCTTGGCGACAGCGTCGGCATTTTGGCCGCAACCTTGTCGGAGATACTGCCCTTCTGGGGAGCTCTCTTGGTCGGTGCTATCCATAACTTTGTTGGGTATGGTTGGATTTGGCTCATCGTCTCTGGTCGAGCTCCCGTTTTGCCTCTCTGGGCTATGTGCGTTCTTGTATTTATGGGAACGAATGGGGAGACGTACTTCAATACAGTTTCACTGGTTTCTTGCGTACAAAACTTTCCGAAAAGTAGGGGCCCTGTGGTTGGGATTCTGAAAGGCTTTGCTGGTTTAAGTGGTGCAATTTTGACTCAGATATATGCAATCATGCATTCTCCTGATTCAGCCAATCTTATATTCATGATTGCAGTAGGTCCTGCACTGGTGGCTATTGGTGTGATGTTTTTAATCAGACCTGTCGCCGGTCATAGACAAGTAAGGCCGTCCGATGGCATGAGCTTTACTAGTGTTTATGGTGTCTGCCTCCTTTTGGCTGCTTATTTGATGGGAGTCATGCTTGTTGAGGATCTTGTTACCTTGAGCCCCACTGTGATAGGCATTTTTACTGCAGTTATGTTTGTCATCCTTCTTACGCCCTTTTTGATTCCGGTGACATTGACTTTTAGCTCGGAGACGACAACATATGCTGAGCAAGAGGCTCTCCTACCACCGTCAGAGAAACAAGAACCTGCTAGAACTGAACCAGATGGTAATGAAGTGATATTTAGTGAGGTGGAAGACGAAAAATCAGAGGGAGAGGACTTACTTCCTGCATCAGAGAGACAAAAACGCATTGCTCAATTGCAAGCGAAACTATTGCAAGCAGCTGCAGAAGGAGCAGTAAGAGTCAAGAGGAGGAAGGGTCCACGTAGAGGGGAAGACTTCACTTTGGGTCAAGCTTTAATCAAAGCAGACTTTTGGCTTATATTTTCCTCCCATCTCCTTGGTTCTGGAACTGGATTGACTGTGATCGATAACCTCGGACAGATGAGCCAGTCTTTAGGTTATGATAATACACATATTTTCGTATCCCTGATCAGCATATGGAACTTTCTCGGCCGTGTTGGTGGTGGATACCTCTCTGAGATTGTTGTGAGAGATTTTGCTTATCCAAGACCCATTGCAATGACGATTGCACAATTCCTTATGATATTTGGACATGTCTTCATCGGTATGGGATGGCCTGGGGCAATGTACATTGGTACTCTCATAACGGGGCTCGGGTACGGGGCTCACTGGGCAATTGTGCCTGCTACTGCCTCTGAATTGTTTGGCTTGAAAAAGTTTGGGGCTTTATACAACTTCATCACTCTCTCAACTCCTGTAGGATCGCTGATATTTTCTGGCTTAATCGCGAGCAGTATATATGATAGTGAAGCAGAGAAGCAAGCTCATAATCACATCTCACAGCTGCAGAGCTCCTCGTCATTTTGGTTCACTAGACTCTACGCCGATGGACCGCACAAGTGCGAGGGTGCTATATGTTTCTTTCTAACTTGTATGATAATGGCTGGATTCTGTGCGATTGCAGGCATGTTAAGTTTAATCTTGGTGTATCGGACGAGGGGGGTTTACTACAACCTCTATGGAAAATCTCGTACATCAACGCTTTCGTAG 1791 45.51 MGRWNEKLVAFINNRWLVFVAAIWLQSCAGIGYLFGSISPVIKTNLSYNQRQIARLGVAKDLGDSVGILAATLSEILPFWGALLVGAIHNFVGYGWIWLIVSGRAPVLPLWAMCVLVFMGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAIMHSPDSANLIFMIAVGPALVAIGVMFLIRPVAGHRQVRPSDGMSFTSVYGVCLLLAAYLMGVMLVEDLVTLSPTVIGIFTAVMFVILLTPFLIPVTLTFSSETTTYAEQEALLPPSEKQEPARTEPDGNEVIFSEVEDEKSEGEDLLPASERQKRIAQLQAKLLQAAAEGAVRVKRRKGPRRGEDFTLGQALIKADFWLIFSSHLLGSGTGLTVIDNLGQMSQSLGYDNTHIFVSLISIWNFLGRVGGGYLSEIVVRDFAYPRPIAMTIAQFLMIFGHVFIGMGWPGAMYIGTLITGLGYGAHWAIVPATASELFGLKKFGALYNFITLSTPVGSLIFSGLIASSIYDSEAEKQAHNHISQLQSSSSFWFTRLYADGPHKCEGAICFFLTCMIMAGFCAIAGMLSLILVYRTRGVYYNLYGKSRTSTLS 596
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8935009 8937644 - ClG42_11g0092500.10 Clacu11g0925 261802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0925 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 586 - GO:0016020(PANTHER)
Clacu11g0925 596 CDD MFS_Mch1p_like 15 568 - -
Clacu11g0925 596 Coils Coil 316 336 - -
Clacu11g0925 596 Gene3D MFS general substrate transporter like domains 364 581 IPR036259 -
Clacu11g0925 596 MobiDBLite consensus disorder prediction 278 297 - -
Clacu11g0925 596 SUPERFAMILY MFS general substrate transporter 212 581 IPR036259 -
Clacu11g0925 596 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Clacu11g0925 596 Pfam Nodulin-like 15 262 IPR010658 -
Clacu11g0925 596 SUPERFAMILY MFS general substrate transporter 10 202 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1236 Clacu-Chr7:27224077 Clacu11g0925 Clacu-Chr11:8935009 2.40E-92 dispersed
Clacu10g1973 Clacu-Chr10:33252910 Clacu11g0925 Clacu-Chr11:8935009 4.40E-81 dispersed
Clacu10g1976 Clacu-Chr10:33278980 Clacu11g0925 Clacu-Chr11:8935009 1.10E-76 dispersed
Clacu11g0925 Clacu-Chr11:8935009 Clacu02g1212 Clacu-Chr2:24605836 1.60E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0925 - - - 0.0