Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu11g0946 | ATGGGAATTATTAGTTTGGGAGAAGAATGTTACATGATGAGTTTAGGAAGTGGAGTAGTGTTGGGAGTGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTATGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAAATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATTAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGACATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTGGCTCCACGCTCTTAA | 1620 | 39.81 | MGIISLGEECYMMSLGSGVVLGVITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKKFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVAPRS | 539 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9379073 | 9392025 | + | ClG42_11g0094600.10 | Clacu11g0946 | 261823 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu11g0946 | 539 | CDD | CYP86A | 77 | 531 | - | - | |
| Clacu11g0946 | 539 | FunFam | Alkane hydroxylase MAH1 | 38 | 539 | - | - | |
| Clacu11g0946 | 539 | PRINTS | E-class P450 group I signature | 398 | 416 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | E-class P450 group I signature | 486 | 509 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | E-class P450 group I signature | 308 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | E-class P450 group I signature | 476 | 486 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | E-class P450 group I signature | 328 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PANTHER | CYTOCHROME P450 | 31 | 531 | - | - | |
| Clacu11g0946 | 539 | PRINTS | P450 superfamily signature | 477 | 486 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | P450 superfamily signature | 486 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | P450 superfamily signature | 399 | 410 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | PRINTS | P450 superfamily signature | 319 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | Gene3D | Cytochrome P450 | 29 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | Coils | Coil | 342 | 362 | - | - | |
| Clacu11g0946 | 539 | Pfam | Cytochrome P450 | 45 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | Pfam | Cytochrome P450 | 378 | 529 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu11g0946 | 539 | SUPERFAMILY | Cytochrome P450 | 35 | 538 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu05g0237 | Clacu-Chr5:2036781 | Clacu11g0946 | Clacu-Chr11:9379073 | 7.40E-109 | dispersed | |
| Clacu05g0240 | Clacu-Chr5:2091815 | Clacu11g0946 | Clacu-Chr11:9379073 | 6.40E-108 | dispersed | |
| Clacu10g1892 | Clacu-Chr10:32508237 | Clacu11g0946 | Clacu-Chr11:9379073 | 4.40E-74 | dispersed | |
| Clacu11g0946 | Clacu-Chr11:9379073 | Clacu01g1782 | Clacu-Chr1:30030663 | 3.90E-15 | dispersed | |
| Clacu01g1276 | Clacu-Chr1:22650366 | Clacu11g0946 | Clacu-Chr11:9379073 | 1.90E-80 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu11g0946 | K20495 | - | csv:101222076 | 928.317 |