Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g0946 ATGGGAATTATTAGTTTGGGAGAAGAATGTTACATGATGAGTTTAGGAAGTGGAGTAGTGTTGGGAGTGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCCAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTTGGAGATGGGATATTCAACGTAGATGGAGAGCTATGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACCTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAAATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATTAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGACATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTGGCTCCACGCTCTTAA 1620 39.81 MGIISLGEECYMMSLGSGVVLGVITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKKFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVAPRS 539
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 9379073 9392025 + ClG42_11g0094600.10 Clacu11g0946 261823
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g0946 539 CDD CYP86A 77 531 - -
Clacu11g0946 539 FunFam Alkane hydroxylase MAH1 38 539 - -
Clacu11g0946 539 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PANTHER CYTOCHROME P450 31 531 - -
Clacu11g0946 539 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 Gene3D Cytochrome P450 29 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 Coils Coil 342 362 - -
Clacu11g0946 539 Pfam Cytochrome P450 45 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 Pfam Cytochrome P450 378 529 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g0946 539 SUPERFAMILY Cytochrome P450 35 538 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g0237 Clacu-Chr5:2036781 Clacu11g0946 Clacu-Chr11:9379073 7.40E-109 dispersed
Clacu05g0240 Clacu-Chr5:2091815 Clacu11g0946 Clacu-Chr11:9379073 6.40E-108 dispersed
Clacu10g1892 Clacu-Chr10:32508237 Clacu11g0946 Clacu-Chr11:9379073 4.40E-74 dispersed
Clacu11g0946 Clacu-Chr11:9379073 Clacu01g1782 Clacu-Chr1:30030663 3.90E-15 dispersed
Clacu01g1276 Clacu-Chr1:22650366 Clacu11g0946 Clacu-Chr11:9379073 1.90E-80 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g0946 K20495 - csv:101222076 928.317