Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1155 | ATGGGGTCCTGCTTGTCTTCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCAACTTCTCCGGCTAAGCATCATCGGAGCAAGAACAGTTCCAAGAGGCGATATGGTTCTAGGAATTCCTCCTTTGGGGATCTCTCACTTCATCGGATCCCCGGCAGGCTCTTCGCTAATGGCTTCACTGATGTCGCGTCTCTGTTCACCCAGCAGGGCAAGAAAGGGACCAATCAGGATGCCATGATTGTTTGGGAGAATTTCGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTTGATGGCCATGGTCCCTATGGTCATATGGTTGCAAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTGAGTGCACATTGGGAGGTTAACTTGACCACGGATGATGTTCATAGAGAGATCAATCTTAATACAGGAAGTATGAACTCGGATGAAGCTACTTCCTTTTTATCTGCTGAAGAAGAGTCAAGGGCCTCCACTGATGTTGATGGAACGGAAAAGCAACCTGAAATTTTCCATACTCTGAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACTGGGAACTCAGAATGCACCAAACTATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTATTGTTAAACAGGGTCAGGATCTTGTCATTGGAAATGTTGGGGACTCCCGAGCTGTTTTGGGTATGAGAGATAAAGATGACTCGCTTGTTGCCATTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAGGTGTAGAGGTCGTGTCTTTGCTCTCCAAGATGAACCTGATGTAGCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCTCGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCAGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTTCTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGTACTATTGCAGCTCGAACTCTGGTCGAAACTGCCATTAAAGCATGGAAACATAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTCTTCCTCGACTCAAACTCCAGCAATCTATCATCTGCTTCCAATACCAAACCGGAAGAGCAACAAAGTTTAACAGAACAAGTCAGCACTGCAGTTGAGAATGAAAATTTCTGTGTCCCAAATGGTCTGAATCGTTCAGGAACTGTCCGAACCACCAGCAAGGAGATTTTGCAGGATGGAAGTGATGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCAGAAGATAAGAAAAGTTATAAAAATTGAAGTTGAGAGAGGTCGGCCCAGCCTTATTAGTGCGTCTGGGGAATTGTTGACACTCTCGTATCGGTAG | 1548 | 45.48 | MGSCLSSESRSPIPGSPTSPAKHHRSKNSSKRRYGSRNSSFGDLSLHRIPGRLFANGFTDVASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDGTEKQPEIFHTLKESFLKAFRVMDWELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLKPNLPAEAERIRRCRGRVFALQDEPDVARVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTIAARTLVETAIKAWKHKYPTSKIDDCAVVCLFLDSNSSNLSSASNTKPEEQQSLTEQVSTAVENENFCVPNGLNRSGTVRTTSKEILQDGSDEEEDESKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDPGKEDKKGQKIRKVIKIEVERGRPSLISASGELLTLSYR | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16443496 | 16446603 | - | ClG42_11g0115500.10 | Clacu11g1155 | 262032 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1155 | 515 | FunFam | probable protein phosphatase 2C 33 | 56 | 383 | - | - | |
Clacu11g1155 | 515 | MobiDBLite | consensus disorder prediction | 146 | 166 | - | - | |
Clacu11g1155 | 515 | CDD | PP2Cc | 61 | 380 | IPR001932 | - | |
Clacu11g1155 | 515 | SUPERFAMILY | PP2C-like | 61 | 381 | IPR036457 | - | |
Clacu11g1155 | 515 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Clacu11g1155 | 515 | Gene3D | - | 59 | 382 | IPR036457 | - | |
Clacu11g1155 | 515 | SMART | PP2C_4 | 52 | 378 | IPR001932 | - | |
Clacu11g1155 | 515 | MobiDBLite | consensus disorder prediction | 1 | 39 | - | - | |
Clacu11g1155 | 515 | PANTHER | PROTEIN PHOSPHATASE | 35 | 379 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Clacu11g1155 | 515 | MobiDBLite | consensus disorder prediction | 419 | 453 | - | - | |
Clacu11g1155 | 515 | MobiDBLite | consensus disorder prediction | 386 | 405 | - | - | |
Clacu11g1155 | 515 | Pfam | Protein phosphatase 2C | 130 | 359 | IPR001932 | - | |
Clacu11g1155 | 515 | ProSiteProfiles | PPM-type phosphatase domain profile. | 61 | 380 | IPR001932 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g1564 | Clacu-Chr2:29032715 | Clacu11g1155 | Clacu-Chr11:16443496 | 1.30E-94 | dispersed | |
Clacu03g1036 | Clacu-Chr3:18360288 | Clacu11g1155 | Clacu-Chr11:16443496 | 3.00E-145 | dispersed | |
Clacu04g0720 | Clacu-Chr4:21408872 | Clacu11g1155 | Clacu-Chr11:16443496 | 1.20E-94 | dispersed | |
Clacu06g0474 | Clacu-Chr6:5517466 | Clacu11g1155 | Clacu-Chr11:16443496 | 4.80E-83 | dispersed | |
Clacu06g0555 | Clacu-Chr6:6292837 | Clacu11g1155 | Clacu-Chr11:16443496 | 2.20E-26 | dispersed | |
Clacu08g0598 | Clacu-Chr8:13261460 | Clacu11g1155 | Clacu-Chr11:16443496 | 1.70E-134 | dispersed | |
Clacu10g0354 | Clacu-Chr10:4496676 | Clacu11g1155 | Clacu-Chr11:16443496 | 8.50E-132 | dispersed | |
Clacu11g1155 | Clacu-Chr11:16443496 | Clacu11g1978 | Clacu-Chr11:30743185 | 1.10E-17 | dispersed | |
Clacu11g1155 | Clacu-Chr11:16443496 | Clacu02g0125 | Clacu-Chr2:1330347 | 1.90E-112 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1155 | - | - | - | 0.0 |