Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1331 | ATGGCTTCCAAAGCCTTCTTTTCTCTCTTTTCAATATTTGTTGTTTCTTTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAACTCGGCTCCAAGAACCTCGTTGTTGTGTTTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGACATCTTCACTGGAAATGGTCAAGATATGATGTTTATTGTTTATGGAGACCATTGGCATAAAATGCGACTCGATATTGCTGAGTTGGTTTCAAAGTTTGAAATGAAGCCTTCGAATGGTATGGAGAAGATTGATGTCCCAGAGAAAGAAGTCAATTCAGTTTGCATATTGCCAACCACTCAGACAGTTGTTTGA | 576 | 43.06 | MASKAFFSLFSIFVVSFVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVFDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMMFIVYGDHWHKMRLDIAELVSKFEMKPSNGMEKIDVPEKEVNSVCILPTTQTVV | 191 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22671405 | 22674389 | + | ClG42_11g0133100.10 | Clacu11g1331 | 262208 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1331 | 191 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 34 | 150 | - | GO:0004497(PANTHER) | |
Clacu11g1331 | 191 | Pfam | Cytochrome P450 | 54 | 160 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1331 | 191 | PRINTS | E-class P450 group I signature | 106 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1331 | 191 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1331 | 191 | SUPERFAMILY | Cytochrome P450 | 50 | 163 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1331 | 191 | Gene3D | Cytochrome P450 | 47 | 172 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu11g1331 | Clacu-Chr11:22671405 | Clacu02g1948 | Clacu-Chr2:33039358 | 2.10E-40 | dispersed | |
Clacu11g1330 | Clacu-Chr11:22661907 | Clacu11g1331 | Clacu-Chr11:22671405 | 1.50E-72 | tandem | |
Clacu11g1331 | Clacu-Chr11:22671405 | Clacu11g1332 | Clacu-Chr11:22678922 | 1.90E-49 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1331 | K00487 | - | csv:101205537 | 265.003 |