Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1331 ATGGCTTCCAAAGCCTTCTTTTCTCTCTTTTCAATATTTGTTGTTTCTTTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAACTCGGCTCCAAGAACCTCGTTGTTGTGTTTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGACATCTTCACTGGAAATGGTCAAGATATGATGTTTATTGTTTATGGAGACCATTGGCATAAAATGCGACTCGATATTGCTGAGTTGGTTTCAAAGTTTGAAATGAAGCCTTCGAATGGTATGGAGAAGATTGATGTCCCAGAGAAAGAAGTCAATTCAGTTTGCATATTGCCAACCACTCAGACAGTTGTTTGA 576 43.06 MASKAFFSLFSIFVVSFVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVFDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMMFIVYGDHWHKMRLDIAELVSKFEMKPSNGMEKIDVPEKEVNSVCILPTTQTVV 191
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 22671405 22674389 + ClG42_11g0133100.10 Clacu11g1331 262208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1331 191 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 34 150 - GO:0004497(PANTHER)
Clacu11g1331 191 Pfam Cytochrome P450 54 160 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1331 191 PRINTS E-class P450 group I signature 106 127 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1331 191 PRINTS E-class P450 group I signature 82 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1331 191 SUPERFAMILY Cytochrome P450 50 163 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu11g1331 191 Gene3D Cytochrome P450 47 172 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu11g1331 Clacu-Chr11:22671405 Clacu02g1948 Clacu-Chr2:33039358 2.10E-40 dispersed
Clacu11g1330 Clacu-Chr11:22661907 Clacu11g1331 Clacu-Chr11:22671405 1.50E-72 tandem
Clacu11g1331 Clacu-Chr11:22671405 Clacu11g1332 Clacu-Chr11:22678922 1.90E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1331 K00487 - csv:101205537 265.003