Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1332 | ATGGGGCATTCTGCAGAAAAGTTTGGTTTCCTTTGCTCAGTCTCTTCACTAGCTTTGGGGTTGATCACCAAGTTCATTTTCCCCAGTTTATTCTTGTCCATTTCCCCAAACATCCTTCCAATCACTCTTTTCATTGCAGTTGTTTTTGCTTTCACCTTCTTTGGCTTATCCAATTTCTCCAAAAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCTTTGTCACAAAAATATGGTTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCTGATGCCGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTGGAGTTTGGATCTCGTCCACGAAATGTTGTCTTCGACATTTTCACTGGTAATGGACAGGATATGGTGTTCACCGTTTATGGCAACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCGTTTTTTACAAACAAAGTTGTGCATAACTACAGTGGCATGTGGGAGGAAGAAATGGATTTAGTTGTTCATGATCTTATGAATAACCCAAAGGTAAAATCTGAAGGGTTAGTCATAAGAAAGCGTTTACAACTGATGTTGTACAATATCATGTATAGAATGATGTTTGATACTAAATTTGAATCTCAAGATGATCCTTTGTTTATTGAGGCAACTAAATTCAATTCTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTCTGCTTAGACCCTTTTTGAGGAGTTACTTGAACAAATGCAAGGATTTGCAAAGCAGGAGGTTGGCATTTTTCAACAACAACTATGTTGAGAAAAGAAGAAAAATTATGACTGCCAATGGAGACAAGCACAGGATAAGTTGTGCTATGGATCATATTATAGATGCTCAGCTAAAAGGAGAAATTAGTGAAGAGAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCGATGGAGTGGGCAATAGCTGAGTTGGTAAACCATCAAACTGTACAACAAAATATCCGAGAGGAAATCTCAACCATCCTAAAAGGAAAGGAAGTCACAGAATCTAACTTACATGAGCTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTTCCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTGGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTTCAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGAGGCAAAGTTGACTTCCGATTCTTACCATTTGGTGTTGGAAGGAGAAGTTGCCCTGGAATTGTTTTGGCGCTGCCAATCTTGGGATTGATCATTGCTAAGTTGGTGACAAATTTTGAAATGAAGCCTCCAATTGGCATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTACATATTGCCAACCACTCAACTGTGGCATTCAAACCTATAACTGCTTAG | 1608 | 40.36 | MGHSAEKFGFLCSVSSLALGLITKFIFPSLFLSISPNILPITLFIAVVFAFTFFGLSNFSKNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGNHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVHDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATKFNSERSRLAQSFEYNYGDFIPLLRPFLRSYLNKCKDLQSRRLAFFNNNYVEKRRKIMTANGDKHRISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHQTVQQNIREEISTILKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIIAKLVTNFEMKPPIGMEKIDVSEKGGQFSLHIANHSTVAFKPITA | 535 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22678922 | 22680673 | + | ClG42_11g0133200.10 | Clacu11g1332 | 262209 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1332 | 535 | Gene3D | Cytochrome P450 | 57 | 528 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 42 | 534 | - | GO:0004497(PANTHER) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 385 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 477 | 500 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 91 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 343 | 369 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 323 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 426 | 450 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 115 | 136 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 210 | 228 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | E-class P450 group I signature | 467 | 477 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 470 | 479 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
Clacu11g1332 | 535 | FunFam | Trans-cinnamate 4-monooxygenase | 56 | 527 | - | - | |
Clacu11g1332 | 535 | Pfam | Cytochrome P450 | 63 | 523 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | P450 superfamily signature | 386 | 397 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | P450 superfamily signature | 468 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | PRINTS | P450 superfamily signature | 334 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Clacu11g1332 | 535 | SUPERFAMILY | Cytochrome P450 | 63 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g1948 | Clacu-Chr2:33039358 | Clacu11g1332 | Clacu-Chr11:22678922 | 9.80E-194 | dispersed | |
Clacu03g0008 | Clacu-Chr3:311668 | Clacu11g1332 | Clacu-Chr11:22678922 | 6.40E-181 | dispersed | |
Clacu11g1330 | Clacu-Chr11:22661907 | Clacu11g1332 | Clacu-Chr11:22678922 | 1.60E-255 | dispersed | |
Clacu11g1332 | Clacu-Chr11:22678922 | Clacu10g1625 | Clacu-Chr10:29605986 | 1.70E-63 | dispersed | |
Clacu11g1331 | Clacu-Chr11:22671405 | Clacu11g1332 | Clacu-Chr11:22678922 | 1.90E-49 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1332 | K00487 | - | csv:101205775 | 1009.59 |