Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1370 | ATGAATCGCAAAAATCAGATCTTGTGGATTTCTGAAAGTACCTTCTTGACATTGGAGACAATGGTGGTGCATTTCCAGCACACTTTTCTTGTGTTCTTGGCGATTCTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACTATTGAAGGAGAACCTATTGTAAGTTACAAAGGTGATCTGGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTCGAGAGGGACTGGAAGGTTAGAAAACTAACAACACACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTCTCCACACCATCCAAGTTTTGCAACATATAATACTGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGCGAAGTTGACCCTGACACTAAGAAGGATTTCTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTGATCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTCGCAGCCATTGATCAGGCTGTACATGATGGGGTGGACATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCATATAGTCCATGGATTGCAACTGTGGCAGCTGCAATTGATGACAGGAGATACAAAAATCATCTGACACTTGGCAATGGAAAAATTCTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCGGCTAATGATGTTCTGTTAGATTCTTCGGTTATGAAGTACAGCCCTTCAGACTGCCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTATGTGGTTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATTAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCGGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGAATTCTTATAACTGATGTCAGCAAGTCCATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGTTTTCAGGAGGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGGACGGACGAGCCGAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGTATGGCAGCACCACATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATTAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTTGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCGGGGCTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTGTGCACAACGGCAGGCATCAACGTTCACGAGATACATAACTATACAAACTCACCTTGCAACTTCACCATGGGACATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTCGTGGGAAGTCAAACCGTTACTCGCACAGTAACAAATGTAGCTGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGATCCGGTTCATCAAGAAAATTTTCGGTAACTCTCACAGCTCGATCACTGACAGGAACATATAGTTTCGGCCAGGTTCTATTGAAGGGCAGTAGAGGACACAAGGTTAGAATTCCTGTAGTAGCCATGGGATACCAACGATGA | 2511 | 43.69 | MNRKNQILWISESTFLTLETMVVHFQHTFLVFLAILVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGISPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFDPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR | 836 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 23999067 | 24006739 | + | ClG42_11g0137000.10 | Clacu11g1370 | 262247 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1370 | 836 | FunFam | Subtilisin-like protease SBT1.5 | 175 | 397 | - | - | |
Clacu11g1370 | 836 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 39 | 148 | IPR037045 | - | |
Clacu11g1370 | 836 | Pfam | Peptidase inhibitor I9 | 84 | 146 | IPR010259 | - | |
Clacu11g1370 | 836 | SUPERFAMILY | Subtilisin-like | 148 | 697 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Clacu11g1370 | 836 | SUPERFAMILY | Protease propeptides/inhibitors | 105 | 146 | - | - | |
Clacu11g1370 | 836 | Pfam | PA domain | 418 | 512 | IPR003137 | - | |
Clacu11g1370 | 836 | PRINTS | Subtilisin serine protease family (S8) signature | 615 | 631 | IPR015500 | - | |
Clacu11g1370 | 836 | PRINTS | Subtilisin serine protease family (S8) signature | 252 | 265 | IPR015500 | - | |
Clacu11g1370 | 836 | PRINTS | Subtilisin serine protease family (S8) signature | 173 | 192 | IPR015500 | - | |
Clacu11g1370 | 836 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 92 | 806 | IPR045051 | - | |
Clacu11g1370 | 836 | Gene3D | - | 710 | 833 | - | - | |
Clacu11g1370 | 836 | CDD | PA_subtilisin_like | 395 | 533 | - | - | |
Clacu11g1370 | 836 | CDD | Peptidases_S8_3 | 149 | 652 | IPR034197 | - | |
Clacu11g1370 | 836 | Gene3D | Peptidase S8/S53 domain | 175 | 706 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Clacu11g1370 | 836 | Pfam | Fibronectin type-III domain | 738 | 830 | IPR041469 | - | |
Clacu11g1370 | 836 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 142 | 693 | - | - | |
Clacu11g1370 | 836 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 178 | 189 | IPR023827 | - | |
Clacu11g1370 | 836 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 616 | 626 | IPR023828 | - | |
Clacu11g1370 | 836 | Gene3D | - | 388 | 553 | - | - | |
Clacu11g1370 | 836 | Pfam | Subtilase family | 173 | 654 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g0994 | Clacu-Chr1:13140100 | Clacu11g1370 | Clacu-Chr11:23999067 | 4.60E-163 | dispersed | |
Clacu01g2628 | Clacu-Chr1:36435208 | Clacu11g1370 | Clacu-Chr11:23999067 | 1.10E-189 | dispersed | |
Clacu10g0395 | Clacu-Chr10:4988883 | Clacu11g1370 | Clacu-Chr11:23999067 | 8.30E-82 | dispersed | |
Clacu10g1893 | Clacu-Chr10:32514731 | Clacu11g1370 | Clacu-Chr11:23999067 | 5.20E-22 | dispersed | |
Clacu11g1370 | Clacu-Chr11:23999067 | Clacu11g1371 | Clacu-Chr11:24013259 | 6.10E-07 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1370 | - | - | - | 0.0 |