Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1370 ATGAATCGCAAAAATCAGATCTTGTGGATTTCTGAAAGTACCTTCTTGACATTGGAGACAATGGTGGTGCATTTCCAGCACACTTTTCTTGTGTTCTTGGCGATTCTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACTATTGAAGGAGAACCTATTGTAAGTTACAAAGGTGATCTGGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTCGAGAGGGACTGGAAGGTTAGAAAACTAACAACACACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTCTCCACACCATCCAAGTTTTGCAACATATAATACTGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGCGAAGTTGACCCTGACACTAAGAAGGATTTCTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTGATCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTCGCAGCCATTGATCAGGCTGTACATGATGGGGTGGACATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCATATAGTCCATGGATTGCAACTGTGGCAGCTGCAATTGATGACAGGAGATACAAAAATCATCTGACACTTGGCAATGGAAAAATTCTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCGGCTAATGATGTTCTGTTAGATTCTTCGGTTATGAAGTACAGCCCTTCAGACTGCCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTATGTGGTTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATTAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCGGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGAATTCTTATAACTGATGTCAGCAAGTCCATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGTTTTCAGGAGGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGGACGGACGAGCCGAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGTATGGCAGCACCACATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATTAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTTGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCGGGGCTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTGTGCACAACGGCAGGCATCAACGTTCACGAGATACATAACTATACAAACTCACCTTGCAACTTCACCATGGGACATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTCGTGGGAAGTCAAACCGTTACTCGCACAGTAACAAATGTAGCTGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGATCCGGTTCATCAAGAAAATTTTCGGTAACTCTCACAGCTCGATCACTGACAGGAACATATAGTTTCGGCCAGGTTCTATTGAAGGGCAGTAGAGGACACAAGGTTAGAATTCCTGTAGTAGCCATGGGATACCAACGATGA 2511 43.69 MNRKNQILWISESTFLTLETMVVHFQHTFLVFLAILVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGISPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFDPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR 836
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23999067 24006739 + ClG42_11g0137000.10 Clacu11g1370 262247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1370 836 FunFam Subtilisin-like protease SBT1.5 175 397 - -
Clacu11g1370 836 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 39 148 IPR037045 -
Clacu11g1370 836 Pfam Peptidase inhibitor I9 84 146 IPR010259 -
Clacu11g1370 836 SUPERFAMILY Subtilisin-like 148 697 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu11g1370 836 SUPERFAMILY Protease propeptides/inhibitors 105 146 - -
Clacu11g1370 836 Pfam PA domain 418 512 IPR003137 -
Clacu11g1370 836 PRINTS Subtilisin serine protease family (S8) signature 615 631 IPR015500 -
Clacu11g1370 836 PRINTS Subtilisin serine protease family (S8) signature 252 265 IPR015500 -
Clacu11g1370 836 PRINTS Subtilisin serine protease family (S8) signature 173 192 IPR015500 -
Clacu11g1370 836 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 92 806 IPR045051 -
Clacu11g1370 836 Gene3D - 710 833 - -
Clacu11g1370 836 CDD PA_subtilisin_like 395 533 - -
Clacu11g1370 836 CDD Peptidases_S8_3 149 652 IPR034197 -
Clacu11g1370 836 Gene3D Peptidase S8/S53 domain 175 706 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu11g1370 836 Pfam Fibronectin type-III domain 738 830 IPR041469 -
Clacu11g1370 836 ProSiteProfiles Serine proteases, subtilase domain profile. 142 693 - -
Clacu11g1370 836 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 178 189 IPR023827 -
Clacu11g1370 836 ProSitePatterns Serine proteases, subtilase family, serine active site. 616 626 IPR023828 -
Clacu11g1370 836 Gene3D - 388 553 - -
Clacu11g1370 836 Pfam Subtilase family 173 654 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0994 Clacu-Chr1:13140100 Clacu11g1370 Clacu-Chr11:23999067 4.60E-163 dispersed
Clacu01g2628 Clacu-Chr1:36435208 Clacu11g1370 Clacu-Chr11:23999067 1.10E-189 dispersed
Clacu10g0395 Clacu-Chr10:4988883 Clacu11g1370 Clacu-Chr11:23999067 8.30E-82 dispersed
Clacu10g1893 Clacu-Chr10:32514731 Clacu11g1370 Clacu-Chr11:23999067 5.20E-22 dispersed
Clacu11g1370 Clacu-Chr11:23999067 Clacu11g1371 Clacu-Chr11:24013259 6.10E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1370 - - - 0.0