Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu11g1504 | ATGGGAAAGCTTAGCTTGAACTGCTGTAATAGCTTCCTTGAGAATTCAAAACCTTATTTTGCCATGATATCCTTACAATTTGGATATGCTGGCATGAACATCATCTCTAAAGTCTCTCTTAGTAGAGGGATGAGTCATTACGTCCTCGTCGTTTATCGACATGCTTTCGCTACCGCTTCTATTGCTCCCTTCGTTCTCTTCTTCGAACGGAGAGGACAGCCAAGGATAACACTCAAAGTTTTCATTCAAATATTTGTGTTGGCTTTGCTTGGCCCGGTTATCGATCAAAATTTCTACTATGCTGGGCTAAAATATACTTCACCAACTTTCTCTTGTGCCATGAGCAACATGCTGCCTGCAATGACATTTGTGATGGCTGTGATCTTTAGGATGGAAAAATTGGAGATGAAGAAATTGAGATGCCAAGCAAAAGTTTTGGGAACTTTAGTGTCAGTGGCTGGAGCAATGTTGATGACTTTATACAAAGGTCCACTTCTTCAAATGGCTTGGTCTAAAAATTCCCATATCACCAATTCTAATGAAACTTCCAACAACAAAGATTGGTTCAAAGGCTCCATTTTCCTCATCATTGCCACTCTTGCTTGGGCTTCTCTCTTTGTTTTGCAGAATGAGGCATTGAAGACATACAAGAACCATCAACTCACTCTCACCACACTCGTGTGTTTTCTTGGGACTTTGCAAGCCATAGCTGTGACTTTAGTAGCGGAGCACAAAGCTTCTGTTTGGACAATTGGTTGGGACATGAATCTTCTTGCTGCTGCCTATGCTGGAATTGTGACATCAAGTATTTCATACTATGTACAAGGGTTGGTGATGAAAAAGAGAGGACCTGTATTTACAACTGCATTTAGTCCTTTGATTATGATACTTGTGGCCATCATGGGCTCTCTCATCCTTGCTGAAAAGATTTTTCTTGGAGGAATAATAGGATCCATCTTGATAGTGTTTGGGCTATATTCAGTACTTTGGGGAAAGCACAAAGAGAATTTGGAGATGATTAAAACTGCTGCTGTTGATGATGAAATACCAAAAGCAATTAAAGCTTCTTCTCAACCAAATATTAATATTAATAATAATAATATTGCAAATAATGTTGAAGCTAATGAGATTGTGACCATGGCACCCAATAAGCTAAGTTCCAATAATAATTCAATTTTCATTTCCATGCCTGCCCTTGAAAACCCATTAAACCCAACCAAATCCCAAGAGAATAATAATAATTGA | 1245 | 38.8 | MGKLSLNCCNSFLENSKPYFAMISLQFGYAGMNIISKVSLSRGMSHYVLVVYRHAFATASIAPFVLFFERRGQPRITLKVFIQIFVLALLGPVIDQNFYYAGLKYTSPTFSCAMSNMLPAMTFVMAVIFRMEKLEMKKLRCQAKVLGTLVSVAGAMLMTLYKGPLLQMAWSKNSHITNSNETSNNKDWFKGSIFLIIATLAWASLFVLQNEALKTYKNHQLTLTTLVCFLGTLQAIAVTLVAEHKASVWTIGWDMNLLAAAYAGIVTSSISYYVQGLVMKKRGPVFTTAFSPLIMILVAIMGSLILAEKIFLGGIIGSILIVFGLYSVLWGKHKENLEMIKTAAVDDEIPKAIKASSQPNININNNNIANNVEANEIVTMAPNKLSSNNNSIFISMPALENPLNPTKSQENNNN | 414 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 26195377 | 26199367 | - | ClG42_11g0150400.10 | Clacu11g1504 | 262381 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu11g1504 | 414 | Pfam | EamA-like transporter family | 19 | 159 | IPR000620 | GO:0016020(InterPro) | |
Clacu11g1504 | 414 | Pfam | EamA-like transporter family | 190 | 329 | IPR000620 | GO:0016020(InterPro) | |
Clacu11g1504 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 249 | 334 | - | - | |
Clacu11g1504 | 414 | PANTHER | WAT1-RELATED PROTEIN | 20 | 350 | IPR030184 | GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Clacu11g1504 | 414 | SUPERFAMILY | Multidrug resistance efflux transporter EmrE | 52 | 162 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g0686 | Clacu-Chr6:7920303 | Clacu11g1504 | Clacu-Chr11:26195377 | 2.00E-52 | dispersed | |
Clacu06g1558 | Clacu-Chr6:26488665 | Clacu11g1504 | Clacu-Chr11:26195377 | 3.90E-62 | dispersed | |
Clacu07g0969 | Clacu-Chr7:23999937 | Clacu11g1504 | Clacu-Chr11:26195377 | 7.70E-50 | dispersed | |
Clacu10g1434 | Clacu-Chr10:27482274 | Clacu11g1504 | Clacu-Chr11:26195377 | 3.20E-37 | dispersed | |
Clacu10g1435 | Clacu-Chr10:27498748 | Clacu11g1504 | Clacu-Chr11:26195377 | 3.00E-43 | dispersed | |
Clacu10g1626 | Clacu-Chr10:29619309 | Clacu11g1504 | Clacu-Chr11:26195377 | 9.70E-09 | dispersed | |
Clacu10g1627 | Clacu-Chr10:29624319 | Clacu11g1504 | Clacu-Chr11:26195377 | 9.80E-125 | dispersed | |
Clacu11g1504 | Clacu-Chr11:26195377 | Clacu11g1749 | Clacu-Chr11:28669297 | 4.70E-93 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu11g1504 | - | - | - | 0.0 |