Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu11g1559 ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGATAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACGGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATAAAAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGCGATGACGTCGTCCATGAAAAGTTGAAGGAGAACAAACATCATATACAACAATTCAATGCTTTCCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGACGTATCAAATAA 708 41.81 MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKHHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 26702776 26707608 - ClG42_11g0155900.10 Clacu11g1559 262436
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu11g1559 235 CDD AdoMet_MTases 74 177 - -
Clacu11g1559 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Clacu11g1559 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Clacu11g1559 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Clacu11g1559 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Clacu11g1559 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0633 Clacu-Chr2:6266575 Clacu11g1559 Clacu-Chr11:26702776 1.60E-64 dispersed
Clacu07g1054 Clacu-Chr7:25069923 Clacu11g1559 Clacu-Chr11:26702776 9.30E-37 dispersed
Clacu11g1559 Clacu-Chr11:26702776 Clacu11g1561 Clacu-Chr11:26722420 3.10E-81 dispersed
Clacu11g1558 Clacu-Chr11:26694717 Clacu11g1559 Clacu-Chr11:26702776 2.90E-105 tandem
Clacu11g1559 Clacu-Chr11:26702776 Clacu11g1560 Clacu-Chr11:26712009 2.90E-108 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu11g1559 K00588 - csv:101212121 379.793